HHsearch alignment for GI: 254780397 and conserved domain: PRK09222

Probab=96.80  E-value=0.0011  Score=42.57  Aligned_cols=137  Identities=17%  Similarity=0.203  Sum_probs=70.7

Q ss_pred             HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE-EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC-CCCCCHHHEE
Q ss_conf             20102456788898999998531345670799-963665445310000121024458886421587643-4555112100
Q gi|254780397|r  181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAI-SGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNII-GPLPADSMFH  258 (343)
Q Consensus       181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV-~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v~-GP~paDt~F~  258 (343)
T Consensus       144 k~iTr~g~eRI~r~AFe~A~~~-~--RkkVT~v~KaNVlk~t~gLf-r~-------v~~eVa~eYPdVe~~~~~VD~~am  212 (482)
T PRK09222        144 KLISRSGSEKIIRYAFEYARKN-N--RKKVTCLTKDNIMKMTDGIF-HK-------VFNEIAKEYPDIEAEHYIIDIGAA  212 (482)
T ss_pred             EEEEHHHHHHHHHHHHHHHHHC-C--CCEEEEEECCCCHHHHHHHH-HH-------HHHHHHHHCCCCEEEEEEHHHHHH
T ss_conf             9965456437999999999970-9--98079997576206677799-99-------999998677986468877778999


Q ss_pred             CCC--CCCCCEEEE--EECCH----HHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             022--366768999--85120----2255554144772799920876475588755222133686683899999999999
Q gi|254780397|r  259 HSA--RQCYDVAIC--MYHDQ----ALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQ  330 (343)
Q Consensus       259 ~~~--~~~~D~vla--mYHDQ----glip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~  330 (343)
T Consensus       213 qLV~~P~~FDVIVt~NLfGDILSD~aa~l~GslGlapSani--G~~~amFEpvHGSAPDIAGk~iANP~a~ILSaaMML~  290 (482)
T PRK09222        213 RLATNPENFDVIVTSNLYGDIISDIAAEISGSVGLAGSANI--GEEYAMFEAVHGSAPDIAGKNIANPSGLLNAAVMMLV  290 (482)
T ss_pred             HHHCCHHHCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC--CCCCEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf             98568455978998864067888898885277554444534--8986688778886112368987590999999999999