HHsearch alignment for GI: 254780397 and conserved domain: pfam02504

>pfam02504 FA_synthesis Fatty acid synthesis protein. The plsX gene is part of the bacterial fab gene cluster which encodes several key fatty acid biosynthetic enzymes. The exact function of the plsX protein in fatty acid synthesis is unknown.
Probab=98.58  E-value=7.5e-06  Score=55.55  Aligned_cols=273  Identities=16%  Similarity=0.218  Sum_probs=161.8

Q ss_pred             CEEE-ECCCCCCCCHHHHHHHHCCC-CHHCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHCCCCCCCEEEECCCCC
Q ss_conf             3899-71898774789999984285-232489899993999999999981899744753861011126785376103332
Q gi|254780397|r    6 PLIL-TQGDPAGIGPDISLKAWASR-QITAIPPFIYIGDVDVLNARAKQLNLSVPLYETDCKNAVSIFKKALPIISSPCG   83 (343)
Q Consensus         6 pI~I-T~GDPaGIGpEIilKal~~~-~~~~~~~~viigd~~~l~~~~k~l~~~~~i~~i~~~~~~~~~~~~i~i~~~~~~   83 (343)
T Consensus         2 kIAvDaMG--GD~~P~~vv~Ga~~al~~~~~~~i~LvG~e~~i~~~l~~~~~~~~i~iv~a~~~I~m~d-----------   68 (322)
T pfam02504         2 RIAIDAMG--GDHGPLEVVKGVLLAAKSAQDLDIVLVGDKDAIDPLVKEAELNSKLTIVHAEGVIEMED-----------   68 (322)
T ss_pred             EEEEECCC--CCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCEEEECCCCCCCCC-----------
T ss_conf             89998259--87584889999999998788976999929999999985167656818996888016898-----------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             20013553100000246778877664301234304432234477764101325647899998342358866521123322
Q gi|254780397|r   84 AKIVTGTPNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVMMLSGP  163 (343)
Q Consensus        84 ~~~~~G~~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~Mll~~~  163 (343)
T Consensus        69 ---~p~~a~-Rk-k--~SSm~~a~~lvk~g~ada~vSaGnTGA~~a~a~~-------~l~~i~gi~-----RPai~~~~P  129 (322)
T pfam02504        69 ---TPLAAI-RK-K--KSSMAVAIDLVKEGEADAAVSAGNTGALMALAML-------RLGRIKGIT-----RPALGTELP  129 (322)
T ss_pred             ---CHHHHH-HC-C--CCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHH-------HHHHHCCCC-----CCEEEEECC
T ss_conf             ---889998-63-6--8819999999732037889953737999999999-------885005888-----644644045


Q ss_pred             CCEEEEECCCCCHHHHHHHC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             11266530453133343201--0245678889899999853134567079996366544531000012102445888642
Q gi|254780397|r  164 QLRTVPVTIHIPIADICRIL--STKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLR  241 (343)
Q Consensus       164 ~L~V~l~TtHiPLk~V~~~i--t~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~  241 (343)
T Consensus       130 t~~----g~~~~lLD~GANv~~~~~~L~qFA~mG~~ya~~~~~~~~PrVgLLNi----G~E~~KG~~---~~kea~~lL~  198 (322)
T pfam02504       130 TVN----GKFTVLLDVGANVDCKPKELVQFALMGSVYAQSLLGIDSPRVGLLNI----GEEEVKGND---LHKQTFKLLK  198 (322)
T ss_pred             CCC----CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC----CCCCCCCHH---HHHHHHHHHH
T ss_conf             579----97589984787877798999999999999999972999980878755----654546539---9999999998


Q ss_pred             HC-CCCCCCCCCCHHHEECCCCCCCCEEEEEECCHHHHHHHHHCC-----------------------------------
Q ss_conf             15-876434555112100022366768999851202255554144-----------------------------------
Q gi|254780397|r  242 ND-NKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLDF-----------------------------------  285 (343)
Q Consensus       242 ~~-g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~f-----------------------------------  285 (343)
T Consensus       199 ~~~~~nf~GnvEg~~i~~----g~~DVvV~DG-F~GNi~LKt~EG~~~~i~~~lk~~~~~~~~~k~~~ll~~~~l~~~~~  273 (322)
T pfam02504       199 ATPGYNFLGNVEGRDILD----GVVDVIVCDG-FTGNVILKTAEGVAKFIGSILKDELKRSKLSKLGALLLSKALKRLKK  273 (322)
T ss_pred             HCCCCCEEEEECCCCCCC----CCCCEEEECC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             289984450013010578----9984899488-40099999987899999999898852077889999999999999986


Q ss_pred             -----CCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             -----772799920876475588755222133686683899999999999998520
Q gi|254780397|r  286 -----NQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQKN  336 (343)
Q Consensus       286 -----~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~~~~~~  336 (343)
T Consensus       274 ~~d~~~~gGa~llGl~g~----------vvk~HG~S~~~a~~naI~~a~~~~~~~~  319 (322)
T pfam02504       274 KFDYKEYGGAVLLGLSGL----------VIKSHGSADKTAIFAAIRQAIELVQTGV  319 (322)
T ss_pred             HCCCCCCCCEEEECCCCC----------EEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             389531198789758843----------8975799998999999999999998386