HHsearch alignment for GI: 254780397 and conserved domain: pfam02504
>pfam02504 FA_synthesis Fatty acid synthesis protein. The plsX gene is part of the bacterial fab gene cluster which encodes several key fatty acid biosynthetic enzymes. The exact function of the plsX protein in fatty acid synthesis is unknown.
Probab=98.58 E-value=7.5e-06 Score=55.55 Aligned_cols=273 Identities=16% Similarity=0.218 Sum_probs=161.8
Q ss_pred CEEE-ECCCCCCCCHHHHHHHHCCC-CHHCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHCCCCCCCEEEECCCCC
Q ss_conf 3899-71898774789999984285-232489899993999999999981899744753861011126785376103332
Q gi|254780397|r 6 PLIL-TQGDPAGIGPDISLKAWASR-QITAIPPFIYIGDVDVLNARAKQLNLSVPLYETDCKNAVSIFKKALPIISSPCG 83 (343)
Q Consensus 6 pI~I-T~GDPaGIGpEIilKal~~~-~~~~~~~~viigd~~~l~~~~k~l~~~~~i~~i~~~~~~~~~~~~i~i~~~~~~ 83 (343)
T Consensus 2 kIAvDaMG--GD~~P~~vv~Ga~~al~~~~~~~i~LvG~e~~i~~~l~~~~~~~~i~iv~a~~~I~m~d----------- 68 (322)
T pfam02504 2 RIAIDAMG--GDHGPLEVVKGVLLAAKSAQDLDIVLVGDKDAIDPLVKEAELNSKLTIVHAEGVIEMED----------- 68 (322)
T ss_pred EEEEECCC--CCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCEEEECCCCCCCCC-----------
T ss_conf 89998259--87584889999999998788976999929999999985167656818996888016898-----------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 20013553100000246778877664301234304432234477764101325647899998342358866521123322
Q gi|254780397|r 84 AKIVTGTPNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPVMMLSGP 163 (343)
Q Consensus 84 ~~~~~G~~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~Mll~~~ 163 (343)
T Consensus 69 ---~p~~a~-Rk-k--~SSm~~a~~lvk~g~ada~vSaGnTGA~~a~a~~-------~l~~i~gi~-----RPai~~~~P 129 (322)
T pfam02504 69 ---TPLAAI-RK-K--KSSMAVAIDLVKEGEADAAVSAGNTGALMALAML-------RLGRIKGIT-----RPALGTELP 129 (322)
T ss_pred ---CHHHHH-HC-C--CCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHH-------HHHHHCCCC-----CCEEEEECC
T ss_conf ---889998-63-6--8819999999732037889953737999999999-------885005888-----644644045
Q ss_pred CCEEEEECCCCCHHHHHHHC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 11266530453133343201--0245678889899999853134567079996366544531000012102445888642
Q gi|254780397|r 164 QLRTVPVTIHIPIADICRIL--STKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLR 241 (343)
Q Consensus 164 ~L~V~l~TtHiPLk~V~~~i--t~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~ 241 (343)
T Consensus 130 t~~----g~~~~lLD~GANv~~~~~~L~qFA~mG~~ya~~~~~~~~PrVgLLNi----G~E~~KG~~---~~kea~~lL~ 198 (322)
T pfam02504 130 TVN----GKFTVLLDVGANVDCKPKELVQFALMGSVYAQSLLGIDSPRVGLLNI----GEEEVKGND---LHKQTFKLLK 198 (322)
T ss_pred CCC----CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC----CCCCCCCHH---HHHHHHHHHH
T ss_conf 579----97589984787877798999999999999999972999980878755----654546539---9999999998
Q ss_pred HC-CCCCCCCCCCHHHEECCCCCCCCEEEEEECCHHHHHHHHHCC-----------------------------------
Q ss_conf 15-876434555112100022366768999851202255554144-----------------------------------
Q gi|254780397|r 242 ND-NKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLDF----------------------------------- 285 (343)
Q Consensus 242 ~~-g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~f----------------------------------- 285 (343)
T Consensus 199 ~~~~~nf~GnvEg~~i~~----g~~DVvV~DG-F~GNi~LKt~EG~~~~i~~~lk~~~~~~~~~k~~~ll~~~~l~~~~~ 273 (322)
T pfam02504 199 ATPGYNFLGNVEGRDILD----GVVDVIVCDG-FTGNVILKTAEGVAKFIGSILKDELKRSKLSKLGALLLSKALKRLKK 273 (322)
T ss_pred HCCCCCEEEEECCCCCCC----CCCCEEEECC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 289984450013010578----9984899488-40099999987899999999898852077889999999999999986
Q ss_pred -----CCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf -----772799920876475588755222133686683899999999999998520
Q gi|254780397|r 286 -----NQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQKN 336 (343)
Q Consensus 286 -----~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~~~~~~ 336 (343)
T Consensus 274 ~~d~~~~gGa~llGl~g~----------vvk~HG~S~~~a~~naI~~a~~~~~~~~ 319 (322)
T pfam02504 274 KFDYKEYGGAVLLGLSGL----------VIKSHGSADKTAIFAAIRQAIELVQTGV 319 (322)
T ss_pred HCCCCCCCCEEEECCCCC----------EEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 389531198789758843----------8975799998999999999999998386