HHsearch alignment of GI: 254780397 and MMDB domain: 1cnz_A_

>1cnz_A (A:) IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium}
Probab=96.47  E-value=0.0024  Score=40.06  Aligned_cols=138  Identities=12%  Similarity=0.220  Sum_probs=83.9

Q ss_pred             HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHHEEC
Q ss_conf             2010245678889899999853134567079996366544531000012102445888642158764-345551121000
Q gi|254780397|r  181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSMFHH  259 (343)
Q Consensus       181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~F~~  259 (343)
                      +.+|...+.+-++...+.-++.    +.|+-+. -...-       ....+...-...+.-++..+| .-+.-.|++...
T Consensus       165 ~~~t~~~~~ri~~~Af~~A~~~----~~kvt~v-~K~nv-------~~~~~g~~~~~~~~a~~~p~I~~~~~~vD~~~~~  232 (363)
T 1cnz_A          165 EVYHRFEIERIARIAFESARKR----RRKVTSI-DKANV-------LQSSILWREIVNDVAKTYPDVELAHMYIDNATMQ  232 (363)
T ss_dssp             EEEEHHHHHHHHHHHHHHHHTT----TSEEEEE-ECTTT-------CHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHH
T ss_pred             EEEEHHHHHHHHHHHHHHHHHC----CCCEEEE-ECCCC-------CCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHH
T ss_conf             5553899999999999999966----9946898-14764-------1025888999999744589649851435479999


Q ss_pred             CCC--CCCCEEEEE------ECCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             223--667689998------512022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r  260 SAR--QCYDVAICM------YHDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL  331 (343)
Q Consensus       260 ~~~--~~~D~vlam------YHDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~  331 (343)
                      -.+  ..||++|+.      -.|++..-.-.+++--+.|+.-. -+.---|-||||.||||||+|||.+|+-|.-+-++.
T Consensus       233 lv~~P~~fdViv~~Nl~GDIlsD~aa~l~Gslg~~psanig~d-~~~~fE~~HGsapdiaG~~~aNP~a~ils~a~mL~~  311 (363)
T 1cnz_A          233 LIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQ-GFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRY  311 (363)
T ss_dssp             HHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTT-SCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHEEECC-CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             8534677754431257777778899998514542111012035-427852777865223798864909999999999984