HHsearch results for GI: 254780397 and protein with PDBid: 1cnz_A
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=97.03 E-value=0.00086 Score=41.86 Aligned_cols=137 Identities=12% Similarity=0.200 Sum_probs=78.8
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC-CCCCCCCCCCHHHHHHHHHHHHCCCCCC-CCCCCHHHEE
Q ss_conf 2010245678889899999853134567079996366544-5310000121024458886421587643-4555112100
Q gi|254780397|r 181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAG-ENATIGIEEKNIIIPAITYLRNDNKNII-GPLPADSMFH 258 (343)
Q Consensus 181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAG-E~G~~G~EE~~iI~PaI~~~~~~g~~v~-GP~paDt~F~ 258 (343)
+.+|+..+.+-++...+.-++. .+ |+-++ -..+.= ..|+ ..-+.++.-++--+|. -..-.|++..
T Consensus 165 ~~~t~~~~~Ri~r~Af~~A~~~---~k-kVt~v-~K~Nilk~~~l--------f~~~~~eva~~yp~i~~~~~~vD~~~~ 231 (363)
T 1cnz_A 165 EVYHRFEIERIARIAFESARKR---RR-KVTSI-DKANVLQSSIL--------WREIVNDVAKTYPDVELAHMYIDNATM 231 (363)
T ss_dssp EEEEHHHHHHHHHHHHHHHHTT---TS-EEEEE-ECTTTCHHHHH--------HHHHHHHHHTTCTTSEEEEEEHHHHHH
T ss_pred EEEEHHHHHHHHHHHHHHHHHC---CC-CEEEE-ECCCCCCCHHH--------HHHHHHHHHCCCCCEEEEEHHHHHHHH
T ss_conf 8863899999999999999967---99-68999-55864431688--------999999986228974885144669999
Q ss_pred CCC--CCCCCEEEE--EE----CCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 022--366768999--85----1202255554144772799920876475588755222133686683899999999999
Q gi|254780397|r 259 HSA--RQCYDVAIC--MY----HDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQ 330 (343)
Q Consensus 259 ~~~--~~~~D~vla--mY----HDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~ 330 (343)
.-. =..||++|+ || -|++.--+--+++--+.|+.-. .+---.|-||||.|||||++|||.+|+.|.-+-++
T Consensus 232 ~lv~~P~~fdViv~~Nl~GDIlSD~~a~l~GglGl~~s~nig~~-~~a~fEp~HGsapdiaGk~~aNP~a~IlS~ammL~ 310 (363)
T 1cnz_A 232 QLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQ-GFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLR 310 (363)
T ss_dssp HHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTT-SCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCEECCC-CCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98508666877854532588999999884399765774244698-73686067887300168886693999999999997
Q ss_pred H
Q ss_conf 9
Q gi|254780397|r 331 L 331 (343)
Q Consensus 331 ~ 331 (343)
.
T Consensus 311 ~ 311 (363)
T 1cnz_A 311 Y 311 (363)
T ss_dssp H
T ss_pred H
T ss_conf 4