HHsearch results for GI: 254780397 and protein with PDBid: 1g2u_A
>1g2u_A IPMDH, 3-isopropylmalate dehydrogenase; beta-barrel, NAD binding, oxidoreductase; 2.10A {Thermus thermophilus HB8} SCOP: c.77.1.1 PDB: 1osj_A 1gc8_A 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1gc9_A 1ipd_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=96.95 E-value=0.00086 Score=41.87 Aligned_cols=137 Identities=15% Similarity=0.255 Sum_probs=77.9
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCHHHEEC
Q ss_conf 2010245678889899999853134567079996366544531000012102445888642158764-345551121000
Q gi|254780397|r 181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRNDNKNI-IGPLPADSMFHH 259 (343)
Q Consensus 181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v-~GP~paDt~F~~ 259 (343)
+.+|++...+-++...+.-++. +.++-+ ..-.. .+-. -+...-+.++..++-.+| .-..-.|.+-..
T Consensus 155 ~~~tr~~~eRi~r~Af~~A~~~----~k~Vt~--v~KaN----v~~~--~~~~~~~~~eva~~yp~i~~~~~~vD~~~~~ 222 (345)
T 1g2u_A 155 ERYSKPEVERVARVAFEVARKR----RKHVVS--VDKAN----VLEV--GEFWRKTVEEVGRGYPDVALEHQYVDAMAMH 222 (345)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTT----TSEEEE--EECTT----TCHH--HHHHHHHHHHHHTTCTTSEEEEEEHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHHHHC----CCCEEE--ECCCC----CCCC--CHHHHHHHHHHHCCCCCEEEEEHHHHHHHHH
T ss_conf 6873999999999999999975----994577--52656----5555--4578899999854289758985037699998
Q ss_pred CC--CCCCCEEEE--EE----CCHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 22--366768999--85----12022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r 260 SA--RQCYDVAIC--MY----HDQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL 331 (343)
Q Consensus 260 ~~--~~~~D~vla--mY----HDQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~ 331 (343)
-. =.+||++|+ || -|++..-.=.++.--+.|+--+-. ---|-||||.||||||+|||.+|+.|.-+-++.
T Consensus 223 lv~~P~~fdViv~~Nl~GDIlSDl~a~l~GglGl~~s~nig~~~a--~fEp~HGsApdiaGk~iaNP~a~Ils~ammL~~ 300 (345)
T 1g2u_A 223 LVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGRGTP--VFEPVHGSAPDIAGKGIANPTAAILSAAMMLEH 300 (345)
T ss_dssp HHHCGGGCSEEEECHHHHHHHHHHHHTTTSCGGGCEEEEEESSCC--EEEESSCCCGGGTTSSCCCCHHHHHHHHHHHHH
T ss_pred HHCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 612876578553141678899999998627866666420378733--124345644450799864969999999999974