HHsearch results for GI: 254780397 and protein with PDBid: 1v53_A
>1v53_A 3-isopropylmalate dehydrogenase; IPMDH, HOMO dimer, X-RAY analysis, oxidoreductase; 2.85A {Bacillus coagulans} SCOP: c.77.1.1 PDB: 2ayq_A 1v5b_A
Probab=97.06 E-value=0.00066 Score=42.55 Aligned_cols=137 Identities=15% Similarity=0.140 Sum_probs=75.0
Q ss_pred HCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCCCCHHHEECC
Q ss_conf 01024567888989999985313456707999636654453100001210244588864215-87643455511210002
Q gi|254780397|r 182 ILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRND-NKNIIGPLPADSMFHHS 260 (343)
Q Consensus 182 ~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~-g~~v~GP~paDt~F~~~ 260 (343)
.+|...+.+.++...+.-++. +.|+.++ -..+ .+- -..-+..-+-+-+++- ++.+ ...-.|++...-
T Consensus 161 ~~t~~~~~riar~af~~A~~~----~kkVt~v-~K~n-----v~~-~~~l~~~~~~eva~~yp~i~~-~~~~vD~~~~~l 228 (366)
T 1v53_A 161 AYTREEIERIIEKAFQLAQIR----RKKLASV-DKAN-----VLE-SSRMWREIAEETAKKYPDVEL-SHMLVDSTSMQL 228 (366)
T ss_dssp EEEHHHHHHHHHHHHHHHHHT----TSEEEEE-ECTT-----TCH-HHHHHHHHHHHHHTTCTTSEE-EEEEHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHC----CCCEEEE-CCCC-----EEC-CCHHHHHHHHHHHHHCCCEEE-EEEECHHHHHHH
T ss_conf 133899999999999999867----9925674-2664-----011-333599999999826897799-998742889998
Q ss_pred C--CCCCCEEEE--EEC----CHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 2--366768999--851----2022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r 261 A--RQCYDVAIC--MYH----DQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL 331 (343)
Q Consensus 261 ~--~~~~D~vla--mYH----DQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~ 331 (343)
. -.+||++|+ ||= |.+-.-+=.++.--+.|+...-. ----|-||||.||||||+|||.+|+-|.-+-++.
T Consensus 229 v~~P~~fdViv~~Nl~GDIlSD~~a~l~GglGl~~s~ni~~d~~-a~fEp~HGsApdiaGk~~aNP~a~ilS~ammL~~ 306 (366)
T 1v53_A 229 IANPGQFDVIVTENMFGDILSDEASVITGSLGMLPSASLRSDRF-GMYEPVHGSAPDIAGQGKANPLGTVLSAALMLRY 306 (366)
T ss_dssp HHCGGGCSEEEECHHHHHHHHHHHTTTTSCTTSCEEEEECSSSC-EEEEESSCCCGGGTTSSCCCCHHHHHHHHHHHHH
T ss_pred HHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCC-EEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 31866566452140688899999998627755466426569864-6861577865776699875949999999999986