HHsearch results for GI: 254780397 and protein with PDBid: 1vi1_A

>1vi1_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, unknown function; HET: MSE; 2.95A {Bacillus subtilis} SCOP: c.77.1.4
Probab=98.16  E-value=2.8e-05  Score=50.80  Aligned_cols=271  Identities=14%  Similarity=0.159  Sum_probs=155.1

Q ss_pred             CCCCCCEEE-ECCCCCCCCHHHHHHHHCCC-CHHCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHCCCCCCCEEEE
Q ss_conf             988883899-71898774789999984285-2324898999939999999999818997447538610111267853761
Q gi|254780397|r    1 MDEFLPLIL-TQGDPAGIGPDISLKAWASR-QITAIPPFIYIGDVDVLNARAKQLNLSVPLYETDCKNAVSIFKKALPII   78 (343)
Q Consensus         1 M~k~~pI~I-T~GDPaGIGpEIilKal~~~-~~~~~~~~viigd~~~l~~~~k~l~~~~~i~~i~~~~~~~~~~~~i~i~   78 (343)
                      |+  .+|+| .||  .--||+.+++..... +-.....++++|+.+.++...+..                  ++.+.++
T Consensus         1 Ms--irIAvDaMG--GD~~P~~vv~Ga~~al~~~~~~~i~LvG~e~~i~~~l~~~------------------~~ri~iv   58 (345)
T 1vi1_A            1 MS--LRIAVDAMG--GDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTT------------------SDRITVL   58 (345)
T ss_dssp             -C--EEEEEESSC--SSSTTHHHHHHHHHHHHHCTTEEEEEEECHHHHHTTCCSC------------------CTTEEEE
T ss_pred             CC--EEEEEEECC--CCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHC------------------CCCEEEE
T ss_conf             95--299998059--8668088999999999978897699992899999998536------------------2663899


Q ss_pred             CCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             033322001355-3100000246778877664301234304432234477764101325647899998342358866521
Q gi|254780397|r   79 SSPCGAKIVTGT-PNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPV  157 (343)
Q Consensus        79 ~~~~~~~~~~G~-~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~  157 (343)
                      +.+..  +.... |...=-+---.|+..|++++++|++||+|.+=-.-..+-.+-+.       |    +.-.+...-.+
T Consensus        59 ~a~~v--I~m~d~p~~alr~kk~SSm~~a~~lvk~g~ada~VSaGnTGAl~a~a~~~-------l----~~i~gi~RPai  125 (345)
T 1vi1_A           59 HADEV--IEPTDEPVRAVRRKKNSSMVLMAQEVAENRADACISAGNTGALMTAGLFI-------V----GRIKGIDRPAL  125 (345)
T ss_dssp             ECCBC--CCTTSCHHHHHHHCTTBHHHHHHHHHHTTSCSEEEECSCHHHHHHHHHHT-------T----CBCTTCSSCEE
T ss_pred             ECCCC--CCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH-------H----HHHCCCCCCCE
T ss_conf             28874--05898768998845565599999983032467798446438999999987-------7----51047555531


Q ss_pred             CCCC-CCC-CEEEEECCCCCHHHHHHHC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHH
Q ss_conf             1233-221-1266530453133343201--02456788898999998531345670799963665445310000121024
Q gi|254780397|r  158 MMLS-GPQ-LRTVPVTIHIPIADICRIL--STKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNII  233 (343)
Q Consensus       158 Mll~-~~~-L~V~l~TtHiPLk~V~~~i--t~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI  233 (343)
                      |-.+ +.+ -.++       |-||=.++  +.+.+.+...+-.-..+..+|+++||++++-.    |+.-.-|+|.   +
T Consensus       126 a~~~Pt~~g~~~~-------llD~GAN~d~~p~~L~qFA~mGs~yak~~~g~~~PrVgLLNi----G~E~~KG~~~---~  191 (345)
T 1vi1_A          126 APTLPTVSGDGFL-------LLDVGANVDAKPEHLVQYAIMGSVYSQQVRGVTSPRVGLLNV----GTEDKKGNEL---T  191 (345)
T ss_dssp             ECEECCSSSCCEE-------EECSSSCSSCCHHHHHHHHHHHHHHHHHTSCCSSCEEEEEES----SSSTTCSCHH---H
T ss_pred             EEECCCCCCCCCE-------EEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC----CCCCCCCCHH---H
T ss_conf             2554566898617-------973785667798999999999999999955999994777635----6656676699---9


Q ss_pred             HHHHHHHHH-CCCCCCCCCCCHHHEECCCCCCCCEEEEEECCHHHHHHHHHCC---------------------------
Q ss_conf             458886421-5876434555112100022366768999851202255554144---------------------------
Q gi|254780397|r  234 IPAITYLRN-DNKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLDF---------------------------  285 (343)
Q Consensus       234 ~PaI~~~~~-~g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~f---------------------------  285 (343)
                      .-|-+.+++ ..++..|-.=++-+|.    ++.|+|||== =-|-+.+|++.-                           
T Consensus       192 kea~~lL~~~~~~nf~GnvEg~di~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~i~~~lk~~~~~~~~~k~~~ll~~  266 (345)
T 1vi1_A          192 KQTFQILKETANINFIGNVEARDLLD----DVADVVVTDG-FTGNVTLKTLEGSALSIFKMMRDVMTSTLTSKLAAAVLK  266 (345)
T ss_dssp             HHHHHHHHSCTTSEEEEEEEGGGGGG----TSCSEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTC-------CCH
T ss_pred             HHHHHHHHHCCCCCEEEECCCCCCCC----CCCEEEEECC-CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999887518961587557665678----9940999788-235999985520678999999999865488888999879


Q ss_pred             -------------CCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             -------------77279992087647558875522213368668389999999999999852
Q gi|254780397|r  286 -------------NQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQK  335 (343)
Q Consensus       286 -------------~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~~~~~  335 (343)
                                   ..|=..-|||.=+.          |.+-|.+|..++.+||++|.++++++
T Consensus       267 ~~l~~l~~~~D~~~~gGA~lLGl~giv----------ik~HGsS~~~ai~nAI~~A~~~~~~~  319 (345)
T 1vi1_A          267 PKLKEMKMKMEYSNYGGASLFGLKAPV----------IKAHGSSDSNAVFRAIRQAREMVSQN  319 (345)
T ss_dssp             HHHHHHHHHHCGGGSCCEEEETBSSCE----------EECCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHCCCCCCCCEEEECCCCEE----------EEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             999999975791207998897378108----------99389999899999999999999966