HHsearch results for GI: 254780397 and protein with PDBid: 1vi1_A
>1vi1_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, unknown function; HET: MSE; 2.95A {Bacillus subtilis} SCOP: c.77.1.4
Probab=98.16 E-value=2.8e-05 Score=50.80 Aligned_cols=271 Identities=14% Similarity=0.159 Sum_probs=155.1
Q ss_pred CCCCCCEEE-ECCCCCCCCHHHHHHHHCCC-CHHCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHCCCCCCCEEEE
Q ss_conf 988883899-71898774789999984285-2324898999939999999999818997447538610111267853761
Q gi|254780397|r 1 MDEFLPLIL-TQGDPAGIGPDISLKAWASR-QITAIPPFIYIGDVDVLNARAKQLNLSVPLYETDCKNAVSIFKKALPII 78 (343)
Q Consensus 1 M~k~~pI~I-T~GDPaGIGpEIilKal~~~-~~~~~~~~viigd~~~l~~~~k~l~~~~~i~~i~~~~~~~~~~~~i~i~ 78 (343)
|+ .+|+| .|| .--||+.+++..... +-.....++++|+.+.++...+.. ++.+.++
T Consensus 1 Ms--irIAvDaMG--GD~~P~~vv~Ga~~al~~~~~~~i~LvG~e~~i~~~l~~~------------------~~ri~iv 58 (345)
T 1vi1_A 1 MS--LRIAVDAMG--GDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTT------------------SDRITVL 58 (345)
T ss_dssp -C--EEEEEESSC--SSSTTHHHHHHHHHHHHHCTTEEEEEEECHHHHHTTCCSC------------------CTTEEEE
T ss_pred CC--EEEEEEECC--CCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHC------------------CCCEEEE
T ss_conf 95--299998059--8668088999999999978897699992899999998536------------------2663899
Q ss_pred CCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 033322001355-3100000246778877664301234304432234477764101325647899998342358866521
Q gi|254780397|r 79 SSPCGAKIVTGT-PNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGITFKPV 157 (343)
Q Consensus 79 ~~~~~~~~~~G~-~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~~~~~ 157 (343)
+.+.. +.... |...=-+---.|+..|++++++|++||+|.+=-.-..+-.+-+. | +.-.+...-.+
T Consensus 59 ~a~~v--I~m~d~p~~alr~kk~SSm~~a~~lvk~g~ada~VSaGnTGAl~a~a~~~-------l----~~i~gi~RPai 125 (345)
T 1vi1_A 59 HADEV--IEPTDEPVRAVRRKKNSSMVLMAQEVAENRADACISAGNTGALMTAGLFI-------V----GRIKGIDRPAL 125 (345)
T ss_dssp ECCBC--CCTTSCHHHHHHHCTTBHHHHHHHHHHTTSCSEEEECSCHHHHHHHHHHT-------T----CBCTTCSSCEE
T ss_pred ECCCC--CCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH-------H----HHHCCCCCCCE
T ss_conf 28874--05898768998845565599999983032467798446438999999987-------7----51047555531
Q ss_pred CCCC-CCC-CEEEEECCCCCHHHHHHHC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHH
Q ss_conf 1233-221-1266530453133343201--02456788898999998531345670799963665445310000121024
Q gi|254780397|r 158 MMLS-GPQ-LRTVPVTIHIPIADICRIL--STKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNII 233 (343)
Q Consensus 158 Mll~-~~~-L~V~l~TtHiPLk~V~~~i--t~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI 233 (343)
|-.+ +.+ -.++ |-||=.++ +.+.+.+...+-.-..+..+|+++||++++-. |+.-.-|+|. +
T Consensus 126 a~~~Pt~~g~~~~-------llD~GAN~d~~p~~L~qFA~mGs~yak~~~g~~~PrVgLLNi----G~E~~KG~~~---~ 191 (345)
T 1vi1_A 126 APTLPTVSGDGFL-------LLDVGANVDAKPEHLVQYAIMGSVYSQQVRGVTSPRVGLLNV----GTEDKKGNEL---T 191 (345)
T ss_dssp ECEECCSSSCCEE-------EECSSSCSSCCHHHHHHHHHHHHHHHHHTSCCSSCEEEEEES----SSSTTCSCHH---H
T ss_pred EEECCCCCCCCCE-------EEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC----CCCCCCCCHH---H
T ss_conf 2554566898617-------973785667798999999999999999955999994777635----6656676699---9
Q ss_pred HHHHHHHHH-CCCCCCCCCCCHHHEECCCCCCCCEEEEEECCHHHHHHHHHCC---------------------------
Q ss_conf 458886421-5876434555112100022366768999851202255554144---------------------------
Q gi|254780397|r 234 IPAITYLRN-DNKNIIGPLPADSMFHHSARQCYDVAICMYHDQALIPIKTLDF--------------------------- 285 (343)
Q Consensus 234 ~PaI~~~~~-~g~~v~GP~paDt~F~~~~~~~~D~vlamYHDQglip~K~l~f--------------------------- 285 (343)
.-|-+.+++ ..++..|-.=++-+|. ++.|+|||== =-|-+.+|++.-
T Consensus 192 kea~~lL~~~~~~nf~GnvEg~di~~----g~~DVvV~DG-FtGNi~LKt~EG~~~~i~~~lk~~~~~~~~~k~~~ll~~ 266 (345)
T 1vi1_A 192 KQTFQILKETANINFIGNVEARDLLD----DVADVVVTDG-FTGNVTLKTLEGSALSIFKMMRDVMTSTLTSKLAAAVLK 266 (345)
T ss_dssp HHHHHHHHSCTTSEEEEEEEGGGGGG----TSCSEEECCH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTC-------CCH
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCCC----CCCEEEEECC-CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999887518961587557665678----9940999788-235999985520678999999999865488888999879
Q ss_pred -------------CCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -------------77279992087647558875522213368668389999999999999852
Q gi|254780397|r 286 -------------NQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQK 335 (343)
Q Consensus 286 -------------~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~~~~~ 335 (343)
..|=..-|||.=+. |.+-|.+|..++.+||++|.++++++
T Consensus 267 ~~l~~l~~~~D~~~~gGA~lLGl~giv----------ik~HGsS~~~ai~nAI~~A~~~~~~~ 319 (345)
T 1vi1_A 267 PKLKEMKMKMEYSNYGGASLFGLKAPV----------IKAHGSSDSNAVFRAIRQAREMVSQN 319 (345)
T ss_dssp HHHHHHHHHHCGGGSCCEEEETBSSCE----------EECCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCCCCCEEEECCCCEE----------EEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999975791207998897378108----------99389999899999999999999966