HHsearch results for GI: 254780397 and protein with PDBid: 1vmi_A
>1vmi_A Putative phosphate acetyltransferase; NP_416953.1, structural genomics, JCSG, protein structure initiative, PSI; 2.32A {Escherichia coli} SCOP: c.77.1.5
Probab=99.04 E-value=4.7e-09 Score=73.45 Aligned_cols=287 Identities=13% Similarity=0.089 Sum_probs=169.1
Q ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHHHHHHHHHHCCCCCC-EEECCCCHHCCCCCCCEEEECCCCC
Q ss_conf 838997189877478999998428523248989999399999999998189974-4753861011126785376103332
Q gi|254780397|r 5 LPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVP-LYETDCKNAVSIFKKALPIISSPCG 83 (343)
Q Consensus 5 ~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~~l~~~~k~l~~~~~-i~~i~~~~~~~~~~~~i~i~~~~~~ 83 (343)
++|++.-|+ -+.+ ++|...-.-...+.||++|++..++..++.++++++ +..+++.+...........+ .
T Consensus 27 krIvf~Ege----d~rv-L~Aa~~~~~egia~PILVG~~~~I~~~~~~~gl~l~~ieIIdp~~~~~~~e~~~~~~----~ 97 (355)
T 1vmi_A 27 ARVVFPDAL----DQRV-LKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRW----L 97 (355)
T ss_dssp CEEEESCCS----SHHH-HHHHHHHHHTTSCEEEEESCHHHHHHHHHHHTCCCTTCEEECTTSCHHHHHHHHHHH----H
T ss_pred CEEEECCCC----CHHH-HHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHH----H
T ss_conf 989971889----9899-999999998799579998689999999997799977778977878989999999999----9
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC-CCCC-CCCC
Q ss_conf 2001355310000024677887766430123430443223447776410132564789999834235886-6521-1233
Q gi|254780397|r 84 AKIVTGTPNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGIT-FKPV-MMLS 161 (343)
Q Consensus 84 ~~~~~G~~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~-~~~~-Mll~ 161 (343)
.-.-+.....+-+...+....|+.++..|++|++|+|-++.... +...+-+..+...+.. ...+ ||+.
T Consensus 98 -~r~~~~~~~~a~~~~~d~~~~Aa~mV~~G~AD~lv~G~~~tt~~---------~l~~~~~iiG~~~g~~~~s~~~~m~~ 167 (355)
T 1vmi_A 98 -ARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTAN---------VLRAGLRIIGLQPGCKTLSSIFLMLP 167 (355)
T ss_dssp -HHHGGGCCTTHHHHTTSHHHHHHHHHHTTSCSEEEECSSSCHHH---------HHHHHHHHTCBCTTCCCCEEEEEEEE
T ss_pred -HHHCCCCHHHHHHHHHCHHHHHHHHHHCCCCCEEECCCCCCHHH---------HHHHHHHHHCCCCCCEEEEEEEEEEC
T ss_conf -98479979999999737177767745367666472377646899---------99999865135764201212456520
Q ss_pred -CCCCEEEEECCCCCHHHHHHHC--CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf -2211266530453133343201--0245678889899999853134567079996366544531000012102445888
Q gi|254780397|r 162 -GPQLRTVPVTIHIPIADICRIL--STKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAIT 238 (343)
Q Consensus 162 -~~~L~V~l~TtHiPLk~V~~~i--t~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~ 238 (343)
.++-.+.+ .|..-.+ |.+.+.+-+....+..++.+| ..||+|++... |.|.--.+......-|.+
T Consensus 168 ~~~~~~l~~-------aD~~vn~~P~~eqla~Ia~~aa~~a~~l~g-~~PkVAlLS~S----~~gs~~~~s~~~~~~a~~ 235 (355)
T 1vmi_A 168 QYSGPALGF-------ADCSVVPQPTAAQLADIALASAETWRAITG-EEPRVAMLSFS----SNGSARHPCVANVQQATE 235 (355)
T ss_dssp SSSCCCEEE-------ESSSSCSSCCHHHHHHHHHHHHHHHHHHHS-SCCEEEEECSC----STTSSCSHHHHHHHHHHH
T ss_pred CCCCCEEEE-------ECCCCCCCCCHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCC----CCCCCCCHHHHHHHHHHH
T ss_conf 468736998-------367666689899999999999999999669-99985521213----577988644899999999
Q ss_pred HHHHC--CCCCCCCCCCHHHEECCC----------CCCCCEEEEEECCHHHHHHHHHC-CCCEEE---EEEE--CCEEEE
Q ss_conf 64215--876434555112100022----------36676899985120225555414-477279---9920--876475
Q gi|254780397|r 239 YLRND--NKNIIGPLPADSMFHHSA----------RQCYDVAICMYHDQALIPIKTLD-FNQTVN---ITLG--LPFVRT 300 (343)
Q Consensus 239 ~~~~~--g~~v~GP~paDt~F~~~~----------~~~~D~vlamYHDQglip~K~l~-f~~~Vn---~t~G--Lp~irt 300 (343)
.++++ ++.|+||+..|.++.+.. .++-|+.|.=-=|-|-|..|++- +..+.. +-+| -|+.-+
T Consensus 236 ~~~~~~~~~~vdGemq~D~Al~~~~~~~k~~~s~l~G~AnvLIfPnl~agNi~yK~l~~~~~~~~iGpiL~G~~~Pv~~~ 315 (355)
T 1vmi_A 236 IVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDL 315 (355)
T ss_dssp HHHHHCTTSEEEEEECHHHHHCHHHHHHHCTTCTTTTCCSEEECSSHHHHHHHHHHHHHHHCEEEEEEEEESBSSCEEEC
T ss_pred HHHHHCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCEEEC
T ss_conf 99722899721477631224279888612888977887868996887888999999998449838707775779988989
Q ss_pred CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 5887552221336866838999999999999985
Q gi|254780397|r 301 SPDHGTAFDIAGSSLTQEESLVSALKIAAQLGYQ 334 (343)
Q Consensus 301 SpdHGTafdiagk~~a~~~s~~~ai~~a~~~~~~ 334 (343)
|.. ++.+..++.+-+|.--++.
T Consensus 316 sr~------------~sv~~i~n~~aiaa~~aq~ 337 (355)
T 1vmi_A 316 SRG------------CSVQEIIELALVAAVPRQT 337 (355)
T ss_dssp CTT------------CCHHHHHHHHHHHHCCC--
T ss_pred CCC------------CCHHHHHHHHHHHHHHHHH
T ss_conf 999------------9999999999999999999