HHsearch results for GI: 254780397 and protein with PDBid: 2d1c_A
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus HB8}
Probab=97.19 E-value=0.00041 Score=43.82 Aligned_cols=138 Identities=16% Similarity=0.172 Sum_probs=77.6
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC-CCCCCHHHEE
Q ss_conf 201024567888989999985313456707999-63665445310000121024458886421587643-4555112100
Q gi|254780397|r 181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAIS-GLNPHAGENATIGIEEKNIIIPAITYLRNDNKNII-GPLPADSMFH 258 (343)
Q Consensus 181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~-gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v~-GP~paDt~F~ 258 (343)
+.+|.....+-++...+.-++. + +-++-++ ==|=-.--.|+| .-+.++..++--+|. -.+=.|.+-.
T Consensus 160 k~itr~~seRI~r~AFe~A~~~-~--rkkVt~v~KaNvmk~t~glf--------~~~~~eva~eyPdI~~e~~~VD~~a~ 228 (496)
T 2d1c_A 160 KLISWKGSEKIVRFAFELARAE-G--RKKVHCATKSNIMKLAEGTL--------KRAFEQVAQEYPDIEAVHIIVDNAAH 228 (496)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHT-T--CCEEEEEECTTTCTTHHHHH--------HHHHHHHHTTCTTSEEEEEEHHHHHH
T ss_pred CEEECCCHHHHHHHHHHHHHHC-C--CCCEEEEECCCHHHHHHHHH--------HHHHHHHHHHCCCEEEEECHHHHHHH
T ss_conf 1152011456778999999864-9--98337751344011225899--------99999998567965998550558999
Q ss_pred C--CCCCCCCEEEE--EEC----CHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 0--22366768999--851----202255554144772799920876475588755222133686683899999999999
Q gi|254780397|r 259 H--SARQCYDVAIC--MYH----DQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQ 330 (343)
Q Consensus 259 ~--~~~~~~D~vla--mYH----DQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~ 330 (343)
. ..-.+||++|+ ||= |.+-.-.=.++.--+.|+. --+----|-||||-||||||+|||.+|+.|.-+-++
T Consensus 229 ~Lv~~P~~FDVIVt~NlfGDILSDlaa~l~GslGlapSaniG--~~~amFEpvHGSAPdiAGk~iANP~a~IlSaamML~ 306 (496)
T 2d1c_A 229 QLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIG--NEVAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLR 306 (496)
T ss_dssp HHHHCGGGCSEEEECHHHHHHHHHHHHTTTTCGGGCEEEEEC--SSCEEEEESSCCCTTTTTSSCCCCHHHHHHHHHHHH
T ss_pred HHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCC--CCCEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 973195337766214214678888888753874345532017--985577778887234379987591999999999999
Q ss_pred H
Q ss_conf 9
Q gi|254780397|r 331 L 331 (343)
Q Consensus 331 ~ 331 (343)
.
T Consensus 307 h 307 (496)
T 2d1c_A 307 Y 307 (496)
T ss_dssp H
T ss_pred H
T ss_conf 8