HHsearch results for GI: 254780397 and protein with PDBid: 2d1c_A

>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus HB8}
Probab=97.19  E-value=0.00041  Score=43.82  Aligned_cols=138  Identities=16%  Similarity=0.172  Sum_probs=77.6

Q ss_pred             HHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-EECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC-CCCCCHHHEE
Q ss_conf             201024567888989999985313456707999-63665445310000121024458886421587643-4555112100
Q gi|254780397|r  181 RILSTKRIIETSDTVYNAMKKYFGINNPRIAIS-GLNPHAGENATIGIEEKNIIIPAITYLRNDNKNII-GPLPADSMFH  258 (343)
Q Consensus       181 ~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~-gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~g~~v~-GP~paDt~F~  258 (343)
                      +.+|.....+-++...+.-++. +  +-++-++ ==|=-.--.|+|        .-+.++..++--+|. -.+=.|.+-.
T Consensus       160 k~itr~~seRI~r~AFe~A~~~-~--rkkVt~v~KaNvmk~t~glf--------~~~~~eva~eyPdI~~e~~~VD~~a~  228 (496)
T 2d1c_A          160 KLISWKGSEKIVRFAFELARAE-G--RKKVHCATKSNIMKLAEGTL--------KRAFEQVAQEYPDIEAVHIIVDNAAH  228 (496)
T ss_dssp             EEEEHHHHHHHHHHHHHHHHHT-T--CCEEEEEECTTTCTTHHHHH--------HHHHHHHHTTCTTSEEEEEEHHHHHH
T ss_pred             CEEECCCHHHHHHHHHHHHHHC-C--CCCEEEEECCCHHHHHHHHH--------HHHHHHHHHHCCCEEEEECHHHHHHH
T ss_conf             1152011456778999999864-9--98337751344011225899--------99999998567965998550558999


Q ss_pred             C--CCCCCCCEEEE--EEC----CHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             0--22366768999--851----202255554144772799920876475588755222133686683899999999999
Q gi|254780397|r  259 H--SARQCYDVAIC--MYH----DQALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQ  330 (343)
Q Consensus       259 ~--~~~~~~D~vla--mYH----DQglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~  330 (343)
                      .  ..-.+||++|+  ||=    |.+-.-.=.++.--+.|+.  --+----|-||||-||||||+|||.+|+.|.-+-++
T Consensus       229 ~Lv~~P~~FDVIVt~NlfGDILSDlaa~l~GslGlapSaniG--~~~amFEpvHGSAPdiAGk~iANP~a~IlSaamML~  306 (496)
T 2d1c_A          229 QLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIG--NEVAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLR  306 (496)
T ss_dssp             HHHHCGGGCSEEEECHHHHHHHHHHHHTTTTCGGGCEEEEEC--SSCEEEEESSCCCTTTTTSSCCCCHHHHHHHHHHHH
T ss_pred             HHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCC--CCCEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf             973195337766214214678888888753874345532017--985577778887234379987591999999999999


Q ss_pred             H
Q ss_conf             9
Q gi|254780397|r  331 L  331 (343)
Q Consensus       331 ~  331 (343)
                      .
T Consensus       307 h  307 (496)
T 2d1c_A          307 Y  307 (496)
T ss_dssp             H
T ss_pred             H
T ss_conf             8