HHSEARCH alignment of GI: 254780397 and SCOP domain: d1v53a1

Alignment
>d1v53a1 c.77.1.1 (A:1-356) 3-isopropylmalate dehydrogenase, IPMDH {Bacillus coagulans [TaxId: 1398]}
Probab=96.74  E-value=0.00048  Score=41.93  Aligned_cols=136  Identities=14%  Similarity=0.167  Sum_probs=75.7

Q ss_pred             HCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCCCCCCHHHEEC
Q ss_conf             01024567888989999985313456707999636654453100001210244588864215--8764345551121000
Q gi|254780397|r  182 ILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAITYLRND--NKNIIGPLPADSMFHH  259 (343)
Q Consensus       182 ~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~~~~~~--g~~v~GP~paDt~F~~  259 (343)
                      .+|.+.+.+.++...+.-++  +  +.|+-++- ..+     .+ . -.....-+.++..++  ++.++ ..-.|.+-.+
T Consensus       161 ~~t~~~~~ri~r~af~~A~~--r--~kkVt~v~-K~n-----v~-~-~~~~~~~~~~eva~eyp~I~~~-~~~vD~~~~~  227 (356)
T d1v53a1         161 AYTREEIERIIEKAFQLAQI--R--RKKLASVD-KAN-----VL-E-SSRMWREIAEETAKKYPDVELS-HMLVDSTSMQ  227 (356)
T ss_dssp             EEEHHHHHHHHHHHHHHHHH--T--TSEEEEEE-CTT-----TC-H-HHHHHHHHHHHHHTTCTTSEEE-EEEHHHHHHH
T ss_pred             EEEEEEEEEHHHHHHHHHHH--C--CCEEEEEE-CCC-----CC-C-CCHHHHHHHHHHHHHCCCEEEE-EEEHHHHHHH
T ss_conf             02321430034577767874--5--98465775-254-----10-2-4505869999998368986999-9883667889


Q ss_pred             C--CCCCCCEEEEE--ECC----HHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             2--23667689998--512----022555541447727999208764755887552221336866838999999999999
Q gi|254780397|r  260 S--ARQCYDVAICM--YHD----QALIPIKTLDFNQTVNITLGLPFVRTSPDHGTAFDIAGSSLTQEESLVSALKIAAQL  331 (343)
Q Consensus       260 ~--~~~~~D~vlam--YHD----Qglip~K~l~f~~~Vn~t~GLp~irtSpdHGTafdiagk~~a~~~s~~~ai~~a~~~  331 (343)
                      -  .-.+||++++.  |=|    -+..-+=.++.--+.|+..-- +----|-||||.||||||+|||.+++-|.-+-++.
T Consensus       228 lv~~P~~fdViv~~Nl~GDIlSDl~a~l~GglGl~~s~ni~~d~-~a~fEp~HGsapdiaGk~~aNP~a~ils~ammL~~  306 (356)
T d1v53a1         228 LIANPGQFDVIVTENMFGDILSDEASVITGSLGMLPSASLRSDR-FGMYEPVHGSAPDIAGQGKANPLGTVLSAALMLRY  306 (356)
T ss_dssp             HHHCGGGCSEEEECHHHHHHHHHHHTTTTSCTTSCEEEEECSSS-CEEEEESSCCCGGGTTSSCCCCHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf             87223446645326788888889998873676311120026873-14633788872344489965929999999999986


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: Dimeric isocitrate & isopropylmalate dehydrogenases
domain: 3-isopropylmalate dehydrogenase, IPMDH
species: Bacillus coagulans [TaxId: 1398]