HHSEARCH alignment of GI: 254780397 and SCOP domain: d1vmia_

Alignment
>d1vmia_ c.77.1.5 (A:) Ethanolamine utilization protein EutD {Escherichia coli [TaxId: 562]}
Probab=98.91  E-value=2.4e-08  Score=67.73  Aligned_cols=285  Identities=12%  Similarity=0.090  Sum_probs=167.1

Q ss_pred             CCCCEEEECCCCCCCCHHHHHHHHCCCCHHCCCCEEEECCHHHHHHHHHHCCCCCC-EEECCCCHHCCCCCCCEEEECCC
Q ss_conf             88838997189877478999998428523248989999399999999998189974-47538610111267853761033
Q gi|254780397|r    3 EFLPLILTQGDPAGIGPDISLKAWASRQITAIPPFIYIGDVDVLNARAKQLNLSVP-LYETDCKNAVSIFKKALPIISSP   81 (343)
Q Consensus         3 k~~pI~IT~GDPaGIGpEIilKal~~~~~~~~~~~viigd~~~l~~~~k~l~~~~~-i~~i~~~~~~~~~~~~i~i~~~~   81 (343)
                      +.++|++.-||=     |-+++|.....-...+.||++|+.+.++..++.+++++. +..+++.++.........-    
T Consensus        19 ~pkrIvf~Eged-----~rvl~Aa~~~~~egi~~pILvG~~~~I~~~~~~~~l~l~~ieIIdp~~~~~~~~~~~~~----   89 (329)
T d1vmia_          19 APARVVFPDALD-----QRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHR----   89 (329)
T ss_dssp             CCCEEEESCCSS-----HHHHHHHHHHHHTTSCEEEEESCHHHHHHHHHHHTCCCTTCEEECTTSCHHHHHHHHHH----
T ss_pred             CCCEEEECCCCC-----HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHH----
T ss_conf             799899758799-----89999999999879968999858999999999769997777898566667778999999----


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC-CCCC-CC
Q ss_conf             322001355310000024677887766430123430443223447776410132564789999834235886-6521-12
Q gi|254780397|r   82 CGAKIVTGTPNPQTASSTIANIEKAVSLTLSGQALAIVTNPIAKFLLYQEKFKFPGHTEFLAELAKKNTGIT-FKPV-MM  159 (343)
Q Consensus        82 ~~~~~~~G~~s~~~g~~~~~sl~~A~~l~~~g~~~alVT~PInK~~l~~aG~~f~GhTE~La~~~~~~~~~~-~~~~-Ml  159 (343)
                      + ....-+....++-+...+....|+.++..|++|++|+|-++......         +.+-+..+...+.. ...+ ||
T Consensus        90 ~-~~r~~~~~~~~a~~~~~d~~~~Aa~mv~~G~aD~lv~G~~~~~~~~l---------~~~~~iig~~~~~~~~s~~~~m  159 (329)
T d1vmia_          90 W-LARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVL---------RAGLRIIGLQPGCKTLSSIFLM  159 (329)
T ss_dssp             H-HHHHGGGCCTTHHHHTTSHHHHHHHHHHTTSCSEEEECSSSCHHHHH---------HHHHHHTCBCTTCCCCEEEEEE
T ss_pred             H-HHHHCCCCHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCHHHHH---------HHHHHHCCCCCCCCEEEEEEEE
T ss_conf             9-99847888999999861363786665505752178526757789998---------7777405877642100025787


Q ss_pred             C-CCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             3-322112665304531333432010245678889899999853134567079996366544531000012102445888
Q gi|254780397|r  160 L-SGPQLRTVPVTIHIPIADICRILSTKRIIETSDTVYNAMKKYFGINNPRIAISGLNPHAGENATIGIEEKNIIIPAIT  238 (343)
Q Consensus       160 l-~~~~L~V~l~TtHiPLk~V~~~it~~~I~~ki~~~~~~l~~~~gi~~PkIaV~gLNPHAGE~G~~G~EE~~iI~PaI~  238 (343)
                      + .+++--+.+.=+++-     -.=|.+.+.+-.....+..++.+| ..||+|+++..    |.|.--.|......-|.+
T Consensus       160 ~~~~~~~~lf~~D~~vn-----~~P~~eqla~Ia~~aa~~a~~l~g-~~PkVAlLS~S----~~gs~~~~s~~~~~~a~~  229 (329)
T d1vmia_         160 LPQYSGPALGFADCSVV-----PQPTAAQLADIALASAETWRAITG-EEPRVAMLSFS----SNGSARHPCVANVQQATE  229 (329)
T ss_dssp             EESSSCCCEEEESSSSC-----SSCCHHHHHHHHHHHHHHHHHHHS-SCCEEEEECSC----STTSSCSHHHHHHHHHHH
T ss_pred             ECCCCCCEEEEECCCCC-----CCCCHHHHHHHHHHHHHHHHHHCC-CCCCCCEEEEE----CCCCCCCHHHHHHHHHHH
T ss_conf             41678716998315776-----577899999999858999998577-43332246540----467776334799999999


Q ss_pred             HHHHC--CCCCCCCCCCHHHEECCC----------CCCCCEEEEEECCHHHHHHHHHC-CCCE--EE-EEEEC--CEEEE
Q ss_conf             64215--876434555112100022----------36676899985120225555414-4772--79-99208--76475
Q gi|254780397|r  239 YLRND--NKNIIGPLPADSMFHHSA----------RQCYDVAICMYHDQALIPIKTLD-FNQT--VN-ITLGL--PFVRT  300 (343)
Q Consensus       239 ~~~~~--g~~v~GP~paDt~F~~~~----------~~~~D~vlamYHDQglip~K~l~-f~~~--Vn-~t~GL--p~irt  300 (343)
                      .++++  ++.++||+..|.++.+..          .++-|+.|.=-=|-|-|..|++- |..+  +- +.+|+  |+.-+
T Consensus       230 ~~~~~~~~~~vdGemq~D~Al~~~~~~~k~~~s~~~G~AnvLI~Pnl~agNi~yK~l~~~~~a~~iGpil~G~~~Pv~~~  309 (329)
T d1vmia_         230 IVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDL  309 (329)
T ss_dssp             HHHHHCTTSEEEEEECHHHHHCHHHHHHHCTTCTTTTCCSEEECSSHHHHHHHHHHHHHHHCEEEEEEEEESBSSCEEEC
T ss_pred             HHHHHCCCCEEECCCCHHHHHCHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEECHHHHCCCCCEEEC
T ss_conf             99823899679656205443077666245899986897998994885887999999999539828843443679987978


Q ss_pred             CCCCCCCHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             5887552221336866838999999999
Q gi|254780397|r  301 SPDHGTAFDIAGSSLTQEESLVSALKIA  328 (343)
Q Consensus       301 SpdHGTafdiagk~~a~~~s~~~ai~~a  328 (343)
                      |..            ++.+..++.+-+|
T Consensus       310 sr~------------~s~~~i~n~~aia  325 (329)
T d1vmia_         310 SRG------------CSVQEIIELALVA  325 (329)
T ss_dssp             CTT------------CCHHHHHHHHHHH
T ss_pred             CCC------------CCHHHHHHHHHHH
T ss_conf             999------------9999999998874


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: Phosphotransacetylase
domain: Ethanolamine utilization protein EutD
species: Escherichia coli [TaxId: 562]