HHsearch alignment for GI: 254780398 and conserved domain: COG0116
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].
Probab=97.12 E-value=0.0015 Score=42.43 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCC---------------------------------------
Q ss_conf 39899999999719899987999758988234677502352---------------------------------------
Q gi|254780398|r 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR--------------------------------------- 71 (284)
Q Consensus 31 ~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~--------------------------------------- 71 (284)
T Consensus 175 LketLAaAil~lagw~~~~pl~DPmCGSGTi~IEAAl~~~niAPg~~R~~~f~~w~~~~~~lw~~~~~ea~~~a~~~~~~ 254 (381)
T COG0116 175 LKETLAAAILLLAGWKPDEPLLDPMCGSGTILIEAALIAANIAPGLNRRFGFEFWDWFDKDLWDKLREEAEERARRGKEL 254 (381)
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 56999999999739999983416887734799999973445687633220045543213888999999999986514766
Q ss_pred -EEEEECCCCCCHHHHHHHHHH--HHCCCCCCHHHHCCCCHHHHCCCCCCEEEEECCCHHH--HHH-HHHHHHH-----H
Q ss_conf -599842554303688787532--2001220000000143155213322201120232246--788-9999985-----2
Q gi|254780398|r 72 -KVIVIEKDQQFFPILKDISSQ--HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI--GTR-LLFNWIS-----A 140 (284)
Q Consensus 72 -~v~aiEiD~~~~~~l~~~~~~--~~~~~~ii~~Dal~~d~~~~~~~~~~~~vvgNLPYnI--ss~-Il~~ll~-----~ 140 (284)
T Consensus 255 ~~~~G~Did~r~i~~Ak~NA~~AGv~d~I~f~~~d~~~l~~~~----~~~gvvI~NPPYGeRlg~~~~v~~LY~~fg~~l 330 (381)
T COG0116 255 PIIYGSDIDPRHIEGAKANARAAGVGDLIEFKQADATDLKEPL----EEYGVVISNPPYGERLGSEALVAKLYREFGRTL 330 (381)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCC----CCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHH
T ss_conf 6589874898999999998997698832899974432166876----669989958983011177046999999999999
Q ss_pred HCCCCCCCHHHHEEEHHHHHHHHHCCC
Q ss_conf 010000001102033447887530123
Q gi|254780398|r 141 DTWPPFWESLTLLFQKEVGERITAQKN 167 (284)
Q Consensus 141 ~~~~~~~~~~vlmvQkEvA~Rl~a~pg 167 (284)
T Consensus 331 k~~~~~ws~~v~tt~e~~~~~~~~ra~ 357 (381)
T COG0116 331 KRLLAGWSRYVFTTSEDLLFCLGLRAD 357 (381)
T ss_pred HHHHCCCCEEEEECCHHHHHHHHHHHC
T ss_conf 987257736999766778899876421