HHsearch alignment for GI: 254780398 and conserved domain: COG0144
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].
Probab=92.91 E-value=0.4 Score=27.30 Aligned_cols=72 Identities=18% Similarity=0.223 Sum_probs=56.0
Q ss_pred HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCC---EEEEECCCCCCHHHHHHHHHHHH-CCCCCCHHHHCCC
Q ss_conf 999999719899987999758988234677502352---59984255430368878753220-0122000000014
Q gi|254780398|r 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR---KVIVIEKDQQFFPILKDISSQHP-NRLEIIQDDALKV 107 (284)
Q Consensus 36 ~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~---~v~aiEiD~~~~~~l~~~~~~~~-~~~~ii~~Dal~~ 107 (284)
T Consensus 145 S~l~a~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~ 220 (355)
T COG0144 145 SQLPALVLDPKPGERVLDLCAAPGGKTTHLAELMENEGAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRL 220 (355)
T ss_pred HHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 7667997199997968880799976999999966899876997449878999999999971998348995133014