HHsearch alignment for GI: 254780398 and conserved domain: COG1565
>COG1565 Uncharacterized conserved protein [Function unknown].
Probab=96.46 E-value=0.013 Score=36.63 Aligned_cols=95 Identities=18% Similarity=0.211 Sum_probs=56.1
Q ss_pred CCCCC--CCCCCHHHHHHH--------HHHCC---CCCCCEEEEECCCCCHHHHHHHHCC---------CCEEEEECCCC
Q ss_conf 36584--112398999999--------99719---8999879997589882346775023---------52599842554
Q gi|254780398|r 23 KYMGQ--NFLLDLNILKKI--------AESSG---SLDGITVIEIGAGPGNLTQMLLTLG---------ARKVIVIEKDQ 80 (284)
Q Consensus 23 k~lGQ--nFL~d~~i~~~i--------v~~~~---~~~~~~VlEIGpG~G~LT~~Ll~~~---------~~~v~aiEiD~ 80 (284)
T Consensus 40 ~~~G~~GDFiTApels~lFGella~~~~~~wq~~g~p~~~~lvEiGaG~G~l~~DiL~~l~~L~P~~~~~~~~~iiE~s~ 119 (370)
T COG1565 40 VKIGRKGDFITAPELSQLFGELLAEQFLQLWQELGRPAPLKLVEIGAGRGTLASDILRTLRRLYPELYEALSYYIIEPSP 119 (370)
T ss_pred HHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCHHHHHHCEEEEEECCH
T ss_conf 11244587452442688999999999999999836899844899679967699999999987597877305599992598
Q ss_pred CCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCCCCEEEEEC
Q ss_conf 30368878753220012200000001431552133222011202
Q gi|254780398|r 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124 (284)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~ii~~Dal~~d~~~~~~~~~~~~vvgN 124 (284)
T Consensus 120 ~L~~~Qk~~L~~~~~~--~~~~-----~~~e~~p~~~~~i~~~N 156 (370)
T COG1565 120 ELRARQKETLKATEDL--IRWV-----EWVEDLPKKFPGIVVSN 156 (370)
T ss_pred HHHHHHHHHHHCCCCC--HHHH-----HHHHHCCCCCCEEEEEC
T ss_conf 9999999987433211--1667-----66875446675699851