HHsearch alignment for GI: 254780398 and conserved domain: COG2230
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane].
Probab=97.89 E-value=3.5e-05 Score=52.53 Aligned_cols=89 Identities=18% Similarity=0.216 Sum_probs=67.7
Q ss_pred CCCCCCCCCCCCCCHH---------HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 9843365841123989---------9999999719899987999758988234677502352599842554303688787
Q gi|254780398|r 19 IIPKKYMGQNFLLDLN---------ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89 (284)
Q Consensus 19 ~~p~k~lGQnFL~d~~---------i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~ 89 (284)
T Consensus 35 Ld~~~~Yscayf~~~~~tL~eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r 114 (283)
T COG2230 35 LDPSMTYSCAYFEDPDMTLEEAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKR 114 (283)
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
T ss_conf 28987624577579988858999999999997569999998987478844999999998499799966899999999999
Q ss_pred HHH--HHCCCCCCHHHHCCC
Q ss_conf 532--200122000000014
Q gi|254780398|r 90 SSQ--HPNRLEIIQDDALKV 107 (284)
Q Consensus 90 ~~~--~~~~~~ii~~Dal~~ 107 (284)
T Consensus 115 ~~~~gl~~~v~v~l~d~rd~ 134 (283)
T COG2230 115 IAARGLEDNVEVRLQDYRDF 134 (283)
T ss_pred HHHCCCCCCCEEEECCCCCC
T ss_conf 99759976607996562103