HHsearch alignment for GI: 254780398 and conserved domain: COG4076
>COG4076 Predicted RNA methylase [General function prediction only].
Probab=97.97 E-value=4e-06 Score=58.38 Aligned_cols=62 Identities=31% Similarity=0.400 Sum_probs=52.5
Q ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH--HHHHCCCCCCHHHHCCCCHHH
Q ss_conf 9879997589882346775023525998425543036887875--322001220000000143155
Q gi|254780398|r 48 GITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEK 111 (284)
Q Consensus 48 ~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~--~~~~~~~~ii~~Dal~~d~~~ 111 (284)
T Consensus 33 ~d~~~DLGaGsGiLs~~Aa~~-A~rViAiE~dPk~a~~a~eN~~v~g~-~n~evv~gDA~~y~fe~ 96 (252)
T COG4076 33 EDTFADLGAGSGILSVVAAHA-AERVIAIEKDPKRARLAEENLHVPGD-VNWEVVVGDARDYDFEN 96 (252)
T ss_pred HHCEEECCCCCCHHHHHHHHH-HCEEEEEECCCHHHHHHHHCCCCCCC-CCEEEEECCCCCCCCCC
T ss_conf 410563468863288988753-20278874180787776505777887-64689805532133234