HHsearch alignment for GI: 254780398 and conserved domain: KOG1540

Probab=97.34  E-value=0.00042  Score=45.81  Aligned_cols=86  Identities=20%  Similarity=0.350  Sum_probs=67.6

Q ss_pred             CCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCC-C------CEEEEECCCCCCHHHHHHHHHH--H
Q ss_conf             36584112398999999997198999879997589882346775023-5------2599842554303688787532--2
Q gi|254780398|r   23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG-A------RKVIVIEKDQQFFPILKDISSQ--H   93 (284)
Q Consensus        23 k~lGQnFL~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~-~------~~v~aiEiD~~~~~~l~~~~~~--~   93 (284)
T Consensus        80 mSlGiHRl----WKd~~v~~L~p~~~m~~lDvaGGTGDiaFril~~v~s~~~~~~~~V~v~Dinp~mL~vgkqRa~~~~l  155 (296)
T KOG1540          80 MSLGIHRL----WKDMFVSKLGPGKGMKVLDVAGGTGDIAFRILRHVKSQFGDRESKVTVLDINPHMLAVGKQRAKKRPL  155 (296)
T ss_pred             HHCCHHHH----HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCC
T ss_conf             62123678----88876621587778758983477525677798761134577776179993898999999877751597


Q ss_pred             -H-CCCCCCHHHHCCCCHHHH
Q ss_conf             -0-012200000001431552
Q gi|254780398|r   94 -P-NRLEIIQDDALKVDFEKF  112 (284)
Q Consensus        94 -~-~~~~ii~~Dal~~d~~~~  112 (284)
T Consensus       156 ~~~~~~~w~~~dAE~LpFdd~  176 (296)
T KOG1540         156 KASSRVEWVEGDAEDLPFDDD  176 (296)
T ss_pred             CCCCCEEEEECCCCCCCCCCC
T ss_conf             768716999477010899977