HHsearch alignment for GI: 254780398 and conserved domain: KOG3420

Probab=97.47  E-value=0.00014  Score=48.74  Aligned_cols=105  Identities=17%  Similarity=0.303  Sum_probs=76.1

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHC----CCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf             843365841123989999999971----9899987999758988234677502352599842554303688787532200
Q gi|254780398|r   20 IPKKYMGQNFLLDLNILKKIAESS----GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN   95 (284)
Q Consensus        20 ~p~k~lGQnFL~d~~i~~~iv~~~----~~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~~~   95 (284)
T Consensus        18 Kpk~~LEQ-Y~T~p~iAasM~~~Ih~TygdiEgkkl~DLgcgcGmLs~a~sm~~~e~vlGfDIdpeALEIf~rNaeEfEv   96 (185)
T KOG3420          18 KPKLLLEQ-YPTRPHIAASMLYTIHNTYGDIEGKKLKDLGCGCGMLSIAFSMPKNESVLGFDIDPEALEIFTRNAEEFEV   96 (185)
T ss_pred             CCCHHHHH-CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCHHHHHH
T ss_conf             43124551-79967899999999986201204746225247611567775057873378640588999998616687523


Q ss_pred             CCCCCHHHHCCCCHHHHCCCCCCEEEEECCCHHH
Q ss_conf             1220000000143155213322201120232246
Q gi|254780398|r   96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI  129 (284)
Q Consensus        96 ~~~ii~~Dal~~d~~~~~~~~~~~~vvgNLPYnI  129 (284)
T Consensus        97 qidlLqcdildle~~~----g~fDtaviNppFGT  126 (185)
T KOG3420          97 QIDLLQCDILDLELKG----GIFDTAVINPPFGT  126 (185)
T ss_pred             HHHEEEEECCCHHCCC----CEEEEEEECCCCCC
T ss_conf             3421222215511058----76766786689876