HHsearch alignment for GI: 254780398 and conserved domain: PRK11188

Probab=94.18  E-value=0.078  Score=31.74  Aligned_cols=54  Identities=24%  Similarity=0.282  Sum_probs=39.7

Q ss_pred             CCCCCEEEEECCCCCHHHHHHHHCC-CC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCC
Q ss_conf             8999879997589882346775023-52-5998425543036887875322001220000000143
Q gi|254780398|r   45 SLDGITVIEIGAGPGNLTQMLLTLG-AR-KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD  108 (284)
Q Consensus        45 ~~~~~~VlEIGpG~G~LT~~Ll~~~-~~-~v~aiEiD~~~~~~l~~~~~~~~~~~~ii~~Dal~~d  108 (284)
T Consensus        49 ~~~~~~VlDLGaAPG~WsQva~~~~~~~g~VigVDl~~~~---------pi~-gv~~i~gDi~~~~  104 (209)
T PRK11188         49 FKPGMTVVDLGAAPGGWSQYAVTQIGDKGRVIACDILPMD---------PIV-GVDFLQGDFRDEL  104 (209)
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCC---------CCC-CCEEECCCCCCHH
T ss_conf             5789989980689975789999973999739998653045---------378-9676403445889