HHsearch alignment for GI: 254780398 and conserved domain: TIGR03533
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific. Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors.
Probab=98.69 E-value=3.9e-08 Score=70.88 Aligned_cols=104 Identities=15% Similarity=0.172 Sum_probs=72.5
Q ss_pred CCCCCCCCCHHHH----------HHHH-HHCCCCCCCEEEEECCCCCHHHHHHHHCCCC-EEEEECCCCCCHHHHHHHHH
Q ss_conf 6584112398999----------9999-9719899987999758988234677502352-59984255430368878753
Q gi|254780398|r 24 YMGQNFLLDLNIL----------KKIA-ESSGSLDGITVIEIGAGPGNLTQMLLTLGAR-KVIVIEKDQQFFPILKDISS 91 (284)
Q Consensus 24 ~lGQnFL~d~~i~----------~~iv-~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~-~v~aiEiD~~~~~~l~~~~~ 91 (284)
T Consensus 87 F~gl~f~V~~~VLIPR~~teeLv~~~l~~~~~~~~~~~iLDlGtGSG~Iai~la~~~p~~~v~a~DiS~~Al~~A~~N~~ 166 (284)
T TIGR03533 87 FAGLEFYVDERVLIPRSPIAELIEDGFAPWLEPEPVKRILDLCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEINIE 166 (284)
T ss_pred ECCCEEEECCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 73847886899543899719999999999842367771555216807999999987899879999899999999999998
Q ss_pred HH--HCCCCCCHHHHCCCCHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 22--001220000000143155213322201120232246788
Q gi|254780398|r 92 QH--PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132 (284)
Q Consensus 92 ~~--~~~~~ii~~Dal~~d~~~~~~~~~~~~vvgNLPYnIss~ 132 (284)
T Consensus 167 ~~~l~~rv~~~~~D~~~~~~~-----~~fDlIVSNPPYI~~~e 204 (284)
T TIGR03533 167 RHGLEDRVTLIQSDLFAALPG-----RKYDLIVSNPPYVDAED 204 (284)
T ss_pred HHCCCCCEEEEECCHHHHCCC-----CCCCEEEECCCCCCHHH
T ss_conf 608543368883514331457-----77787997799788465