HHsearch alignment for GI: 254780398 and conserved domain: TIGR03587
>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase. Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme
Probab=95.43 E-value=0.03 Score=34.35 Aligned_cols=80 Identities=16% Similarity=0.151 Sum_probs=52.9
Q ss_pred CCCCCCC-HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 8411239-899999999719899987999758988234677502352-59984255430368878753220012200000
Q gi|254780398|r 26 GQNFLLD-LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR-KVIVIEKDQQFFPILKDISSQHPNRLEIIQDD 103 (284)
Q Consensus 26 GQnFL~d-~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~-~v~aiEiD~~~~~~l~~~~~~~~~~~~ii~~D 103 (284)
T Consensus 23 ~~~~~~sn~~~f~~~l~~~~--~ikSilE~GcNIGlNL~ALk~L~P~~~l~gIEIN~~A~~~lk~~~~~----~~i~n~S 96 (204)
T TIGR03587 23 RQSLVAAKLAMFARALNRLP--KIASILELGANIGMNLAALKRLLPFKHIYGVEINEYAVEKAKAYLPN----INIIQGS 96 (204)
T ss_pred CHHHHHHHHHHHHHHHHCCC--CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCC----CEEEECC
T ss_conf 34778889999999983578--88826896688477699998748744049995399999999865897----2699653
Q ss_pred HCCCCHHH
Q ss_conf 00143155
Q gi|254780398|r 104 ALKVDFEK 111 (284)
Q Consensus 104 al~~d~~~ 111 (284)
T Consensus 97 Ild~~~~~ 104 (204)
T TIGR03587 97 LFDPFKDN 104 (204)
T ss_pred CCCCCCCC
T ss_conf 34667787