HHsearch alignment for GI: 254780398 and conserved domain: pfam01728
>pfam01728 FtsJ FtsJ-like methyltransferase. This family consists of FtsJ from various bacterial and archaeal sources FtsJ is a methyltransferase, but actually has no effect on cell division. FtsJ's substrate is the 23S rRNA. The 1.5 A crystal structure of FtsJ in complex with its cofactor S-adenosylmethionine revealed that FtsJ has a methyltransferase fold. This family also includes the N terminus of flaviviral NS5 protein. It has been hypothesized that the N-terminal domain of NS5 is a methyltransferase involved in viral RNA capping.
Probab=94.87 E-value=0.13 Score=30.35 Aligned_cols=53 Identities=26% Similarity=0.517 Sum_probs=39.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHHCCC-CEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCC
Q ss_conf 9998799975898823467750235-25998425543036887875322001220000000143
Q gi|254780398|r 46 LDGITVIEIGAGPGNLTQMLLTLGA-RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD 108 (284)
Q Consensus 46 ~~~~~VlEIGpG~G~LT~~Ll~~~~-~~v~aiEiD~~~~~~l~~~~~~~~~~~~ii~~Dal~~d 108 (284)
T Consensus 20 ~~~~~vlDLg~aPGgwsq~~~~~~~~~~v~~vDl~~~---------~~-~~~~~~i~gDi~~~~ 73 (176)
T pfam01728 20 PGGKTVLDLGAAPGGFSQVLLERGAKGRVVAVDLGPM---------KP-IQGVTFLRGDITDPE 73 (176)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCC---------CC-CCCCEEECCCCCCHH
T ss_conf 7999999968999769999998566873999973446---------56-778456516766878