HHsearch alignment for GI: 254780398 and conserved domain: pfam03291
>pfam03291 Pox_MCEL mRNA capping enzyme. This family of enzymes are related to pfam03919.
Probab=94.57 E-value=0.15 Score=30.00 Aligned_cols=81 Identities=12% Similarity=0.142 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHC-CCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCC-----------CCC
Q ss_conf 989999999971-98999879997589882346775023525998425543036887875322001-----------220
Q gi|254780398|r 32 DLNILKKIAESS-GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR-----------LEI 99 (284)
Q Consensus 32 d~~i~~~iv~~~-~~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~~~~-----------~~i 99 (284)
T Consensus 47 Ks~LI~~~~~~~~~~~~~~~VLDl~CGkGGDL~Kw~~~~i~~~vgiDis~~sI~~A~~RY~~~~~~~~~~~~~~~f~~~f 126 (327)
T pfam03291 47 KSLLISLYASKTFQDKPKRKVLDLDCGKGGDLEKYFKGGISGLIGTDIAEVSIEQAQERYNDLNSRSKSKYYKFDFIAEF 126 (327)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
T ss_conf 99999999887514688987998368664457889747986899966899999999999998642114444566750012
Q ss_pred CHHHHCCCCHHHH
Q ss_conf 0000001431552
Q gi|254780398|r 100 IQDDALKVDFEKF 112 (284)
Q Consensus 100 i~~Dal~~d~~~~ 112 (284)
T Consensus 127 ~~~D~~~~~l~~~ 139 (327)
T pfam03291 127 ITGDCFVSSVREV 139 (327)
T ss_pred EECCCCHHHHHHH
T ss_conf 3156215678775