HHsearch results for GI: 254780398 and protein with PDBid: 1zq9_A
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=100.00 E-value=0 Score=519.15 Aligned_cols=248 Identities=27% Similarity=0.451 Sum_probs=225.2
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH--HCCCC
Q ss_conf 4336584112398999999997198999879997589882346775023525998425543036887875322--00122
Q gi|254780398|r 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLE 98 (284)
Q Consensus 21 p~k~lGQnFL~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~--~~~~~ 98 (284)
+.|.||||||+|++++++||+.+++.++|.|||||||+|+||+.|++++ ++|+|||+|+++++.|++.+... .++++
T Consensus 2 ~n~~LGQnFL~d~~i~~~Iv~~~~~~~~d~VlEIGPG~G~LT~~Ll~~~-~~v~aiE~D~~l~~~L~~~~~~~~~~~~~~ 80 (285)
T 1zq9_A 2 SNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVAELHKRVQGTPVASKLQ 80 (285)
T ss_dssp ------CCEECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTSTTGGGEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCC-CCEEEEEECHHHHHHHHHHHHCCCCCCCEE
T ss_conf 9998684607798999999997089999979996897219999998049-966999987899999998762012100344
Q ss_pred CCHHHHCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHEEEHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 00000001431552133222011202322467889999985201000000110203344788753012312332345432
Q gi|254780398|r 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178 (284)
Q Consensus 99 ii~~Dal~~d~~~~~~~~~~~~vvgNLPYnIss~Il~~ll~~~~~~~~~~~~vlmvQkEvA~Rl~a~pg~k~Yg~LSv~~ 178 (284)
++++|++++|++. +++|||||||||||+|+.+++.+.. .+..|++|+|||||+||+|+||+++||+|||++
T Consensus 81 ii~~D~l~~d~~~------~~~vVgNLPYnIss~ii~~~~~~~~---~~~~~vlm~QkEvA~Rl~A~pgsk~yg~LSv~~ 151 (285)
T 1zq9_A 81 VLVGDVLKTDLPF------FDTCVANLPYQISSPFVFKLLLHRP---FFRCAILMFQREFALRLVAKPGDKLYCRLSINT 151 (285)
T ss_dssp EEESCTTTSCCCC------CSEEEEECCGGGHHHHHHHHHHCSS---CCSEEEEEEEHHHHHHHHCCTTCTTCSHHHHHH
T ss_pred EECHHHHHCHHHH------HHHEECCCHHHHHHHHHHHHHHCCC---CCCEEEEEECHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf 5406654110554------4321102216568899999875176---421245762189999997047997324103331
Q ss_pred CCCCCEEEECCCCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC------------
Q ss_conf 01332012000110000105787578873012588553476789999999972731389998763181------------
Q gi|254780398|r 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG------------ 246 (284)
Q Consensus 179 q~~~~v~~~~~V~~~~F~P~PkVdS~vi~l~pk~~~~~~~~~~~~~~~~~~F~~RRK~l~~~L~~~~~------------ 246 (284)
|++|+++++++|||++|+|+|||||+||+++|++.+...+.+.|+++++.+|++|||+|+|+|++...
T Consensus 152 q~~~~v~~~~~V~~~~F~P~PkVdSavv~l~pk~~~~~~~~~~~~~~v~~~F~~RRK~l~n~Lk~~~~~~~l~~~~~~~~ 231 (285)
T 1zq9_A 152 QLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHC 231 (285)
T ss_dssp HHHEEEEEEEEECGGGEESCCSSCEEEEEEEECSSCCSCCHHHHHHHHHHHHTTTTSBHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHEEEEEEECHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHC
T ss_conf 01101115678467984138873179999855788862219999999999868406448988713020778877478755
Q ss_pred -----------------HHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHC
Q ss_conf -----------------789997877746571208999999999998636
Q gi|254780398|r 247 -----------------ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279 (284)
Q Consensus 247 -----------------~~~l~~~~i~~~~R~e~Ls~~~~~~L~~~l~~~ 279 (284)
..+++.+|++ +.|||+||++||++|++.|.+.
T Consensus 232 ~i~~~~rpe~l~~~~~i~~~l~~~g~~-~~R~E~Ls~~~f~~L~~~l~~~ 280 (285)
T 1zq9_A 232 SVHNIIIPEDFSIADKIQQILTSTGFS-DKRARSMDIDDFIRLLHGFNAE 280 (285)
T ss_dssp HHHTCCCCTTCCHHHHHHHHHHHHTCT-TCBGGGCCHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCC-CCCHHHCCHHHHHHHHHHHHHC
T ss_conf 888544732056999999999856997-7880449999999999999975