HHsearch results for GI: 254780398 and protein with PDBid: 2ih2_A

>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.09  E-value=7.2e-10  Score=80.34  Aligned_cols=102  Identities=19%  Similarity=0.192  Sum_probs=79.7

Q ss_pred             HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCC--CCEEEEECCCCCCHHHHHHHH
Q ss_conf             999818984336584112398999999997198999879997589882346775023--525998425543036887875
Q gi|254780398|r   13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG--ARKVIVIEKDQQFFPILKDIS   90 (284)
Q Consensus        13 ll~~~~~~p~k~lGQnFL~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~--~~~v~aiEiD~~~~~~l~~~~   90 (284)
                      +|....=-.+|++||.| +...+++.|++.+...+++.|+|-+||.|.+-.+++++.  ..+++++|+|+..++.++   
T Consensus         6 ~~~~~s~~~~k~~G~~y-TP~~i~~~~~~~l~~~~~~~IlDPacGsG~FL~~~~~~~~~~~~i~G~did~~~~~la~---   81 (421)
T 2ih2_A            6 LLSLPSNSAPRSLGRVE-TPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPP---   81 (421)
T ss_dssp             ---------------CC-CCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCT---
T ss_pred             HHHHHHHHCCCCCCEEC-CCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHH---
T ss_conf             64211001334298788-91999999999478999699996877646999999986776786999979899999999---


Q ss_pred             HHHHCCCCCCHHHHCCCCHHHHCCCCCCEEEEECCCHH
Q ss_conf             32200122000000014315521332220112023224
Q gi|254780398|r   91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN  128 (284)
Q Consensus        91 ~~~~~~~~ii~~Dal~~d~~~~~~~~~~~~vvgNLPYn  128 (284)
                           ..+++++|++..++.+-++     .||||.||.
T Consensus        82 -----~~~i~~~D~l~~~~~~~fD-----~VigNPPy~  109 (421)
T 2ih2_A           82 -----WAEGILADFLLWEPGEAFD-----LILGNPPYG  109 (421)
T ss_dssp             -----TEEEEESCGGGCCCSSCEE-----EEEECCCCC
T ss_pred             -----HHHHHHCCCCCCCCCCCCC-----EEEECCCCC
T ss_conf             -----7427737733368545777-----787257655