HHsearch results for GI: 254780398 and protein with PDBid: 2yvl_A
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural genomics, NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus VF5}
Probab=98.96 E-value=2.3e-09 Score=77.23 Aligned_cols=93 Identities=14% Similarity=0.121 Sum_probs=76.1
Q ss_pred CCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH--CCCCCCHHHHCCC
Q ss_conf 23989999999971989998799975898823467750235259984255430368878753220--0122000000014
Q gi|254780398|r 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP--NRLEIIQDDALKV 107 (284)
Q Consensus 30 L~d~~i~~~iv~~~~~~~~~~VlEIGpG~G~LT~~Ll~~~~~~v~aiEiD~~~~~~l~~~~~~~~--~~~~ii~~Dal~~ 107 (284)
.+-+.-+..|+..+++.+++.|||+|+|.|++|..|++.+ .+|+++|+++.+++.+++.+..+. ++++++++|+.+.
T Consensus 74 iiypkD~~~Ii~~l~i~pG~rVLEiGtGsG~lt~~La~~~-g~v~t~e~~e~~~~~A~~n~~~~g~~~nv~~~~~D~~~~ 152 (248)
T 2yvl_A 74 IIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA-GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDA 152 (248)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTS
T ss_pred CCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCC-CEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHC
T ss_conf 0678999999998289999979973743119999998607-879998288999999999899700577059999122214
Q ss_pred CHHHHCCCCCCEEEEECCCH
Q ss_conf 31552133222011202322
Q gi|254780398|r 108 DFEKFFNISSPIRIIANLPY 127 (284)
Q Consensus 108 d~~~~~~~~~~~~vvgNLPY 127 (284)
++++- ..-.|+.++|-
T Consensus 153 ~~~~~----~fD~V~ld~p~ 168 (248)
T 2yvl_A 153 EVPEG----IFHAAFVDVRE 168 (248)
T ss_dssp CCCTT----CBSEEEECSSC
T ss_pred CCCCC----CCCEEEEECCC
T ss_conf 32458----78999991787