PSIBLAST alignment of GI: 254780398 and protein with PDB id: 3fyd
>gi|242556505|pdb|3FYD|A Chain A, Crystal Structure Of Dim1 From The Thermophilic Archeon, Methanocaldococcus Jannaschi Length = 263
Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 28/268 (10%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q FL+D N + K ES+ V+EIG G G LT+ L A+KV VIE D+ P
Sbjct: 1 QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTE-ELAKNAKKVYVIEIDKSLEPYA 59
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + N I D + N +++ANLPY I + + F I
Sbjct: 60 NKLKELYNNIEIIWGDA-----LKVDLNKLDFNKVVANLPYQISSPITFKLIK-----RG 109
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
++ L++Q E +R+ A + YGRLSV R ++ + P F+P PKV S ++
Sbjct: 110 FDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIV 169
Query: 207 HFIP-HLNPIPCCLESLKKITQEAFGKRRKTLRQSL----KRL-GGENLLHQAGIET--- 257
P + F R K++R++L K L ++ + + +
Sbjct: 170 KIKPNKGKYHIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEMKKILEDFLNT 229
Query: 258 --------NLRAENLSIEDFCRITNILT 277
N + LS++D ++N
Sbjct: 230 NSEIKNLINEKVFKLSVKDIVNLSNEFY 257