RPSBLAST alignment for GI: 254780398 and conserved domain: pfam00398
>gnl|CDD|109456 pfam00398, RrnaAD, Ribosomal RNA adenine dimethylase. Length = 258
Score = 159 bits (405), Expect = 7e-40
Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 13/263 (4%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
++ GQNFL + ++ +I + + + TV+EIG G G LT+ L A++V+ IE D
Sbjct: 4 GRRSYGQNFLTNKKVINRIVDKANLQESDTVLEIGPGKGALTEELAKR-AKQVVAIEIDP 62
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ L+ + HPN +E++ D LK F K P ++ N+PYNI T ++ +
Sbjct: 63 RLAKRLQKKLALHPN-VEVVHQDFLKFSFPKHE----PFLVVGNIPYNITTPIVKKLLFE 117
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + L+ QKE R+ A+ S Y RL+VLT T ++ + F P PK
Sbjct: 118 PRFG--RVKMLLVVQKEFARRLLARPGSKIYSRLTVLTEPFTDIKLVAKVPRSSFRPPPK 175
Query: 201 VTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA---GI 255
V S ++ +P+ L+ + ++ F + ++L SL+RL + I
Sbjct: 176 VDSALVRLERRDHPLLPVKDLKKYDYLVRKLFNGKGRSLFTSLRRLFPGGQVQALSKTRI 235
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
N LS E + I L
Sbjct: 236 NDNALVGKLSPEQWLTIFKELAK 258