RPSBLAST alignment for GI: 254780398 and conserved domain: PRK14896

>gnl|CDD|184890 PRK14896, ksgA, 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional. Length = 258

 Score =  186 bits (475), Expect = 5e-48
 Identities = 86/268 (32%), Positives = 126/268 (47%), Gaps = 22/268 (8%)

Query: 21  PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
             K +GQ+FL+D  ++ +I E +   DG  V+EIG G G LT  L    A+KV  IE D 
Sbjct: 3   MNKKLGQHFLIDDRVVDRIVEYAEDTDGDPVLEIGPGKGALTDELAKR-AKKVYAIELDP 61

Query: 81  QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
           +    L+D      N +EII+ DALKVD  +F N      +++NLPY I + + F  +  
Sbjct: 62  RLAEFLRDDEIAAGN-VEIIEGDALKVDLPEF-NK-----VVSNLPYQISSPITFKLLKH 114

Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
                 +E   L++QKE  ER+ A+  +  YGRLSV+  +     ++  + P  F P PK
Sbjct: 115 G-----FEPAVLMYQKEFAERMVAKPGTKEYGRLSVMVQYYADVEIVEKVPPGAFSPKPK 169

Query: 201 VTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRRKTLRQSLKRLGGE-------NLLHQ 252
           V S V+   P         E       +  F  RRKTLR +LK             ++  
Sbjct: 170 VDSAVVRLTPREPKYEVYDEDFFDDFVKALFQHRRKTLRNALKNSAHISGKEDIKAVVEA 229

Query: 253 AGIET-NLRAENLSIEDFCRITNILTDN 279
              E  N R   LS E+   + N+L + 
Sbjct: 230 LPEELLNKRVFQLSPEEIAELANLLYEV 257