RPSBLAST alignment of GI: 254780398 and protein with PDBid: 1ne2
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 Length = 200
Score = 40.8 bits (95), Expect = 4e-04
Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 18/135 (13%)
Query: 3 MNNKSHSLKTILSHYKII--PKKYMGQNFLLDLNILKKI---AESSGSLDGITVIEIGAG 57
M K+ L+ L + K Y+ Q + D + + G++ G +VI+ G G
Sbjct: 4 MGIKND-LEIRLQKLQQQGNFKNYLEQ-YPTDASTAAYFLIEIYNDGNIGGRSVIDAGTG 61
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G L LGA V + D K ++ + + D ++ K+
Sbjct: 62 NGILACGSYLLGAESVTAFDIDPDAIETAK----RNCGGVNFMVADVSEIS-GKYD---- 112
Query: 118 PIRIIANLPYNIGTR 132
I N P+ +
Sbjct: 113 --TWIMNPPFGSVVK 125