HHsearch alignment for GI: 254780399 and conserved domain: COG0323
>COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair].
Probab=100.00 E-value=0 Score=1204.15 Aligned_cols=592 Identities=39% Similarity=0.710 Sum_probs=515.2
Q ss_pred CC-CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCCCCCCC
Q ss_conf 96-74588899998526872269789999999877726996799999809843999998889988989998750246656
Q gi|254780399|r 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 (594)
Q Consensus 1 m~-I~~L~~~~~~~Iaagevi~~~~svVkELveNSlDAgAt~I~v~i~~~g~~~i~V~DnG~Gi~~~dl~~~~~rh~TSK 79 (594)
T Consensus 1 M~~Ir~L~~~l~nqIAAGEVIerPaSVVKELVENSlDAGAt~I~I~ve~gG~~~I~V~DNG~Gi~~~Dl~la~~rHaTSK 80 (638)
T COG0323 1 MPKIRQLPPDLVNQIAAGEVIERPASVVKELVENSLDAGATRIDIEVEGGGLKLIRVRDNGSGIDKEDLPLALLRHATSK 80 (638)
T ss_pred CCCCEECCHHHHHHHCCCCEEECHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 99666699899977336664405889999998610304998899999359801899988999999899999986514645
Q ss_pred CH--HHHHHCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCEEEEECCCCCC-CCCCCCCCCCCEEEEEHHHHHHHHHHH
Q ss_conf 31--244112148840489998762024899980489863015511010000-021101256757885210121125431
Q gi|254780399|r 80 IS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLN 156 (594)
Q Consensus 80 i~--~dl~~i~t~GFRGEAL~sIa~vs~l~i~s~~~~~~~~~~~~~~~g~~~-~~~~~~~~~GT~V~V~~LF~N~PvRrk 156 (594)
T Consensus 81 I~~~~DL~~I~TlGFRGEAL~SIasVsrlti~Srt~~~~~~~~~~~~g~~~~~~~~p~a~~~GTtVeV~dLF~NtPaRrK 160 (638)
T COG0323 81 IASLEDLFRIRTLGFRGEALASIASVSRLTITSRTAEASEGTQIYAEGGGMEVTVKPAAHPVGTTVEVRDLFYNTPARRK 160 (638)
T ss_pred CCCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHCCCHHHHH
T ss_conf 78655687743567338779998875444899416776763899962884112334777999989984571255847665
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf 03453689999999999987318997499998798307997178810489999973216665431002244203656666
Q gi|254780399|r 157 FLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 (594)
Q Consensus 157 flks~~~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~~~~l~~~~~~~~l~~ri~~i~G~~~~~~l~~i~~~~~~~~i~G~ 236 (594)
T Consensus 161 flks~~~E~~~i~~vv~r~ALahp~I~F~l~~~gk~~~~~~~~~~~~~~~~ri~~i~G~~~~~~~l~i~~~~~~~~l~G~ 240 (638)
T COG0323 161 FLKSEKTEFGHITELINRYALAHPDISFSLSHNGKLRIELLKLPGTGDLEERIAAVYGTEFLKNALPIENEHEDLRLSGY 240 (638)
T ss_pred HHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEEE
T ss_conf 41453899999999999987307972799998890414788657787578999998686988752034567786699999
Q ss_pred ECCCCCCCCCCHHHHHHHCCCHHHCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHCCCCCCHHHHHHHCCHHHHHH
Q ss_conf 21611033232066775152100075888999987554427999807999999606571247571111255359799999
Q gi|254780399|r 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN 316 (594)
Q Consensus 237 is~P~~~r~~~~~q~ifVNgR~V~~~~l~~AI~~aY~~~l~~g~~P~~vL~i~i~p~~vDVNVHP~K~eVrf~de~~i~~ 316 (594)
T Consensus 241 v~~P~~~r~~~~~q~~fVNgR~V~~~~l~~Ai~~aY~~~L~~~r~P~~vL~l~l~p~~vDVNVHP~K~EVrf~~~~~i~~ 320 (638)
T COG0323 241 VSLPEFTRASRDYQYLFVNGRPVRDKLLNHALREAYADYLPRGRYPVFVLFLELDPELVDVNVHPAKKEVRFSDERLVHD 320 (638)
T ss_pred EECCEECCCCCCCEEEEECCCEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHEECCCCCCCCEEEECCHHHHHH
T ss_conf 82560135787744999889881158999999999861066888767999998771230005589855588159899999
Q ss_pred HHHHHHHHHHHHCCCCCCCHH-----HHHHCCCCCCC-----CC-----CCCCCCCCCCCCCCCCCCCCCCC--------
Q ss_conf 999978988753178876101-----12100112433-----35-----54557744566554310001232--------
Q gi|254780399|r 317 FIIQSIQKAINKKGISTSSVL-----SKKMISSFHQD-----NA-----PKTHLPKYATSLTNTQEKLFLQE-------- 373 (594)
Q Consensus 317 ~i~~~i~~~L~~~~~~~~~~~-----~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~-------- 373 (594)
T Consensus 321 ~I~~~I~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (638)
T COG0323 321 LIYEAIKEALAQQGLIPPASVEAPKSASQPLPAFQEPSPLPESRIQKSKVAKSGSSKSDAPSIAEPASGASPSPASPSIR 400 (638)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999997445667420014645433320003676542223333553345677654433356565667665666655
Q ss_pred ------CCCCC-----------CCCCCCCCCCCC-CCCCCCCCHHHHHHCCCCEEEEECCCCCEEECCCCEEECCHHHHH
Q ss_conf ------22352-----------000001222100-000123410111100572113104551000025863540058998
Q gi|254780399|r 374 ------NRLST-----------NDLLPSDDPTYS-EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 (594)
Q Consensus 374 ------~~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~igQ~~~~yIl~~~~~gL~iIDQHAAh 435 (594)
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~i~q~~~~yil~e~~~~L~lvDqhaa~ 480 (638)
T COG0323 401 PLSKNILPESSPGSLKNEDRSYDDLLEEPAESEDKQEEAEQKAISEDVFPLGEAIGQVHGTYILAEHEDGLVLVDQHAAH 480 (638)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCEEEEEHHHHH
T ss_conf 44322355545442110012333223345012012234310024323453626999953739999858988998768756
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHH
Q ss_conf 99999998522103884211112222346783477779998999986695999607987999952611155678999999
Q gi|254780399|r 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 (594)
Q Consensus 436 ERI~yE~l~~~~~~~~~~~Q~Ll~P~~i~Ls~~e~~~l~~~~~~l~~~Gf~~e~~g~~~~~i~~iP~~l~~~~~~~~l~d 515 (594)
T Consensus 481 Eri~ye~l~~~~~~~~-~~Q~LliP~~~~l~~~e~~~~~~~~~~l~~~G~~i~~~g~~~~~v~~vP~~l~~~~~~~~i~~ 559 (638)
T COG0323 481 ERILYEKLKNELGNVG-ELQPLLIPIRLELSPEEADVLEEHKEELEKLGFEIESFGENSVAVRSVPAMLGKAEVQELIRE 559 (638)
T ss_pred HHHHHHHHHHHHCCCC-CCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCHHHCCCHHHHHHHH
T ss_conf 8999999998752445-452344482541498999999998999986788999738946999816824354216889999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHCCC
Q ss_conf 9999985788664689999999976348666458888989999999999818888788788727998388899764187
Q gi|254780399|r 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 (594)
Q Consensus 516 ll~~l~~~~~~~~~~~~~~~~l~s~ACr~AIk~gd~L~~~e~~~Li~~L~~c~~P~~CpHGRPt~~~l~~~el~k~F~R 594 (594)
T Consensus 560 l~~~~~~-~~~~~~~~~~~~~~a~~aC~~sik~~~~l~~~~m~~Ll~~~~~~~~~~~cpHGRp~~~~~~~~~l~~~F~r 637 (638)
T COG0323 560 LLDDLLE-GKLKDLKELLEELAATMACRSAVKAGRELSAEEMNALLRDLEACPNPWTCPHGRPTYIVLSLAELERLFKR 637 (638)
T ss_pred HHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHCC
T ss_conf 9997640-45410567999999999987766057626899999999999868886679999983576048889986378