HHsearch alignment for GI: 254780399 and conserved domain: COG1389

Probab=99.36  E-value=3.7e-11  Score=99.85  Aligned_cols=166  Identities=22%  Similarity=0.247  Sum_probs=114.9

Q ss_pred             CCCHHHHHHHHHHHHHHCCCC-----EEEEEEECCCEEE--EEEEECCCCCCHHHHHHHHCC-CCCCCCHHHHH--HCCC
Q ss_conf             269789999999877726996-----7999998098439--999988899889899987502-46656312441--1214
Q gi|254780399|r   20 IERPSIAIKELIENSLDAESS-----RVETVIAGGGKSF--FQITDNGFGMTSEEIPMAVQR-HCTSKISDDFS--NIHT   89 (594)
Q Consensus        20 i~~~~svVkELveNSlDAgAt-----~I~v~i~~~g~~~--i~V~DnG~Gi~~~dl~~~~~r-h~TSKi~~dl~--~i~t   89 (594)
T Consensus        34 ~RsL~~tv~ElV~NSLDA~eeaGILPdI~v~I~~~~~d~y~v~veDNGpGIP~e~IPkvFGk~LygSKfh~~~QsRGqqG  113 (538)
T COG1389          34 IRSLTTTVHELVTNSLDACEEAGILPDIKVEIERIGKDHYKVIVEDNGPGIPEEQIPKVFGKMLYGSKFHRNIQSRGQQG  113 (538)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCC
T ss_conf             06899999999853165687608887659999854775589999348999985675789988860232323443255324


Q ss_pred             CCCCHHHHHHHHHHEE-EEEEEECCCCCCCEEEEE--C----CCCCCCC---CCCCCCCCCEEEEEHHHHHHHHHHHCCC
Q ss_conf             8840489998762024-899980489863015511--0----1000002---1101256757885210121125431034
Q gi|254780399|r   90 FGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAI--S----GEKISSV---RPVAMNPGTIVEVRDLFFTIPARLNFLK  159 (594)
Q Consensus        90 ~GFRGEAL~sIa~vs~-l~i~s~~~~~~~~~~~~~--~----~g~~~~~---~~~~~~~GT~V~V~~LF~N~PvRrkflk  159 (594)
T Consensus       114 iGis~avLysQmTtGkPv~V~s~T~~s~~~~~~~l~id~~kNEp~Iv~r~~~~~~~~~hGT~Vel~-~~~~~~~~~~q--  190 (538)
T COG1389         114 IGISAAVLYSQMTTGKPVRVISSTGDSGTAYEYELKIDVQKNEPEIVERGEVENPGGWHGTRVELE-LKGVWYRAKRQ--  190 (538)
T ss_pred             CCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHEECCCCCCCCCCCCEEEEEE-ECCCCHHHCCC--
T ss_conf             247899999875179866999537888624899999517888762000022247888775079999-55530542224--


Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE
Q ss_conf             536899999999999873189974999987983079
Q gi|254780399|r  160 SEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK  195 (594)
Q Consensus       160 s~~~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~~~~  195 (594)
T Consensus       191 -------gi~eYlkrTaiinPhA~I~l~dPdG~~~v  219 (538)
T COG1389         191 -------GIYEYLKRTAIINPHARIVLKDPDGNLVV  219 (538)
T ss_pred             -------CHHHHHHHHHHCCCCEEEEEECCCCCEEE
T ss_conf             -------79999988753387417999889986787