HHsearch alignment for GI: 254780399 and conserved domain: COG2205
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].
Probab=95.57 E-value=0.047 Score=34.40 Aligned_cols=95 Identities=12% Similarity=0.137 Sum_probs=56.0
Q ss_pred ECCCEEEEEECCCCCC-----CCCHHHHHHHHHHHHHHCCCCCC-----------------------H----HHHHHHHH
Q ss_conf 0798799995261115-----56789999999999985788664-----------------------6----89999999
Q gi|254780399|r 490 FGPNAIAIREIPAILS-----KKNIPQLLRDIIDEIIDSSTTYT-----------------------L----QDRIENIL 537 (594)
Q Consensus 490 ~g~~~~~i~~iP~~l~-----~~~~~~~l~dll~~l~~~~~~~~-----------------------~----~~~~~~~l 537 (594)
T Consensus 753 ~~~~~-i~v~~~~dl~li~~D~~LieQVLiNLleNA~Kyap~~s~I~I~~~~~~~~v~~~V~DeGpGIP~~~~~~IFD~F 831 (890)
T COG2205 753 FTGHK-IVVSVPVDLPLIHVDSPLIEQVLINLLENALKYAPPGSEIRINAGVERENVVFSVIDEGPGIPEGELERIFDKF 831 (890)
T ss_pred CCCCE-EEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 47835-89955888716764788999999999987874289997699999982456999997189998856788764654
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCCEEEEEECHH
Q ss_conf 9763486664588889899999999998188887-887887279983888
Q gi|254780399|r 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS-QCNHGRPTFIKLKLS 586 (594)
Q Consensus 538 ~s~ACr~AIk~gd~L~~~e~~~Li~~L~~c~~P~-~CpHGRPt~~~l~~~ 586 (594)
T Consensus 832 ~r~~~~~~-~~G~GLGLsIc~~iv~ahgG~I~a~~~~~gGa~f~~~LP~~ 880 (890)
T COG2205 832 YRGNKESA-TRGVGLGLAICRGIVEAHGGTISAENNPGGGAIFVFTLPVE 880 (890)
T ss_pred HCCCCCCC-CCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECC
T ss_conf 14888778-88766229999999997488689877699935899994068