HHsearch alignment for GI: 254780399 and conserved domain: COG3275
>COG3275 LytS Putative regulator of cell autolysis [Signal transduction mechanisms].
Probab=95.63 E-value=0.02 Score=37.07 Aligned_cols=21 Identities=29% Similarity=0.449 Sum_probs=7.2
Q ss_pred ECCCEEEEEECCCCCCCCCHH
Q ss_conf 079879999526111556789
Q gi|254780399|r 490 FGPNAIAIREIPAILSKKNIP 510 (594)
Q Consensus 490 ~g~~~~~i~~iP~~l~~~~~~ 510 (594)
T Consensus 437 F~~rL~v~i~id~~l~~~~iP 457 (557)
T COG3275 437 FGDRLDVVIDIDEELRQVQIP 457 (557)
T ss_pred CCCCEEEEEECCHHHHHCCCC
T ss_conf 488447999468777533686