HHsearch alignment for GI: 254780399 and conserved domain: COG3275

>COG3275 LytS Putative regulator of cell autolysis [Signal transduction mechanisms].
Probab=95.63  E-value=0.02  Score=37.07  Aligned_cols=21  Identities=29%  Similarity=0.449  Sum_probs=7.2

Q ss_pred             ECCCEEEEEECCCCCCCCCHH
Q ss_conf             079879999526111556789
Q gi|254780399|r  490 FGPNAIAIREIPAILSKKNIP  510 (594)
Q Consensus       490 ~g~~~~~i~~iP~~l~~~~~~  510 (594)
T Consensus       437 F~~rL~v~i~id~~l~~~~iP  457 (557)
T COG3275         437 FGDRLDVVIDIDEELRQVQIP  457 (557)
T ss_pred             CCCCEEEEEECCHHHHHCCCC
T ss_conf             488447999468777533686