HHsearch alignment for GI: 254780399 and conserved domain: COG5002
>COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=95.07 E-value=0.073 Score=33.05 Aligned_cols=23 Identities=4% Similarity=0.017 Sum_probs=17.3
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 86664588889899999999998
Q gi|254780399|r 543 YGSIRSGRKMQSIEMNRLLREME 565 (594)
Q Consensus 543 r~AIk~gd~L~~~e~~~Li~~L~ 565 (594)
T Consensus 405 RsR~~gGTGLGLaIakeiV~~hg 427 (459)
T COG5002 405 RSRKMGGTGLGLAIAKEIVQAHG 427 (459)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHC
T ss_conf 54037877612999999999709