HHsearch alignment for GI: 254780399 and conserved domain: KOG1977
>KOG1977 consensus.
Probab=100.00 E-value=0 Score=568.10 Aligned_cols=300 Identities=25% Similarity=0.339 Sum_probs=243.5
Q ss_pred CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCH
Q ss_conf 67458889999852687226978999999987772699679999980984399999888998898999875024665631
Q gi|254780399|r 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 (594)
Q Consensus 2 ~I~~L~~~~~~~Iaagevi~~~~svVkELveNSlDAgAt~I~v~i~~~g~~~i~V~DnG~Gi~~~dl~~~~~rh~TSKi~ 81 (594)
T Consensus 1 ~Ik~L~~~V~~~lrSg~~~~sla~~VeElv~NSiDA~At~V~v~V~~~t~-sv~ViDdG~G~~rdDl~~lg~ry~TSK~h 79 (1142)
T KOG1977 1 MIKCLSVEVQAKLRSGLAISSLAQCVEELVLNSIDAEATCVAVRVNMETF-SVQVIDDGFGMGRDDLEKLGNRYFTSKCH 79 (1142)
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEE-EEEEEECCCCCCHHHHHHHHHHHHHHHCE
T ss_conf 96556466889876360478799999999861225575279999657506-79998568776678899987655443200
Q ss_pred --HHHHHCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCEE--EEECCCCCC--CCCCCCCCCCCEEEEEHHHHHHHHHH
Q ss_conf --244112148840489998762024899980489863015--511010000--02110125675788521012112543
Q gi|254780399|r 82 --DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ--IAISGEKIS--SVRPVAMNPGTIVEVRDLFFTIPARL 155 (594)
Q Consensus 82 --~dl~~i~t~GFRGEAL~sIa~vs~l~i~s~~~~~~~~~~--~~~~~g~~~--~~~~~~~~~GT~V~V~~LF~N~PvRr 155 (594)
T Consensus 80 ~~ndl~~~~tyGfRGeALasIsd~s~l~v~skkk~r~~~~~~kk~~~gs~~~~l~iD~~R~~sGTtVtV~dlfY~lPVRR 159 (1142)
T KOG1977 80 SVNDLENPRTYGFRGEALASISDMSSLVVISKKKNRTMKTFVKKFQSGSALKALEIDVTRASSGTTVTVYDLFYQLPVRR 159 (1142)
T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEHHHHHCCHHHH
T ss_conf 00001362002543466642431044645554138850689998741221103665533246885898478440334566
Q ss_pred HCC-CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 103-4536899999999999873189974999987983079971788104899999732166654310022442036566
Q gi|254780399|r 156 NFL-KSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 (594)
Q Consensus 156 kfl-ks~~~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~~~~l~~~~~~~~l~~ri~~i~G~~~~~~l~~i~~~~~~~~i~ 234 (594)
T Consensus 160 r~k~~~P~k~fe~Ik~~i~~i~lmHp~iSfsv~~~~s~~~~lq~n~s-~~~~eil----------------fr~k~~e~~ 222 (1142)
T KOG1977 160 RLKCMDPRKEFEKIKQRIEAISLMHPSISFSVRNDVSGSMVLQLNKS-QKLREIL----------------FRYKEFELS 222 (1142)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCC-CHHHHHH----------------HHHCCCCCC
T ss_conf 55028878899999999999975266404788752675545642742-0025552----------------220332222
Q ss_pred EEECCCCCCCCCCHHHHHHHCCCHHHCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHCCCCCCHHHHHHHCCHHHH
Q ss_conf 66216110332320667751521000758889999875544279998079999996065712475711112553597999
Q gi|254780399|r 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 (594)
Q Consensus 235 G~is~P~~~r~~~~~q~ifVNgR~V~~~~l~~AI~~aY~~~l~~g~~P~~vL~i~i~p~~vDVNVHP~K~eVrf~de~~i 314 (594)
T Consensus 223 -----~s~~~~N~t~g~l~v~~~~~~~~~kh~~~~q~lR~~~-~~~~P~yvi~v~cp~~ly~vs~epakt~ieF~~w~~~ 296 (1142)
T KOG1977 223 -----SSEAHYNKTMGFLFVNKRLVLRTKKHKLIDQLLRKES-IICKPKYVINVQCPFCLYDVSMEPAKTLIEFQNWDTL 296 (1142)
T ss_pred -----CCHHCCCCCCCEEEECCHHHHCCCHHHHHHHHHHHHH-EECCCCCEEECCCCHHHHHHHCCCCCCHHHHHCCHHH
T ss_conf -----2111003210203302233303100468999877530-3005750342256246666105722011323042466
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999978988
Q gi|254780399|r 315 RNFIIQSIQKA 325 (594)
Q Consensus 315 ~~~i~~~i~~~ 325 (594)
T Consensus 297 l~~I~~~~~~~ 307 (1142)
T KOG1977 297 LFCIQEGVKMF 307 (1142)
T ss_pred HHHHHHHHHHH
T ss_conf 75997755555