HHsearch alignment for GI: 254780399 and conserved domain: PRK04069
>PRK04069 serine-protein kinase RsbW; Provisional.
Probab=94.01 E-value=0.55 Score=26.74 Aligned_cols=86 Identities=19% Similarity=0.181 Sum_probs=56.1
Q ss_pred CCCCCHHHHHHHHHHHHHHCCC-----CEEEEE--EECCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCC
Q ss_conf 7226978999999987772699-----679999--980984399999888998898999875024665631244112148
Q gi|254780399|r 18 EIIERPSIAIKELIENSLDAES-----SRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTF 90 (594)
Q Consensus 18 evi~~~~svVkELveNSlDAgA-----t~I~v~--i~~~g~~~i~V~DnG~Gi~~~dl~~~~~rh~TSKi~~dl~~i~t~ 90 (594)
T Consensus 38 e~i~di~LAV~EA~tNaI~Hay~~~~~~~i~i~~~~~~~-~l~i~V~D~G~gfD~~~~~~~~~P~~~~~---~l~~~--- 110 (158)
T PRK04069 38 DDIEDLKIAVSEACTNAVQHAYKEEEVGEINIRFEIYED-RLEIVVADNGDSFDYETTKSKIGPYDPSE---PIDDL--- 110 (158)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECC-EEEEEEEECCCCCCHHHCCCCCCCCCCCC---CHHHC---
T ss_conf 999889999999999999975156999479999999599-99999999174879567432458888888---61113---
Q ss_pred CCCHHHHHHHHHHE-EEEEEE
Q ss_conf 84048999876202-489998
Q gi|254780399|r 91 GFRGEALPSIGAVS-HLTLMS 110 (594)
Q Consensus 91 GFRGEAL~sIa~vs-~l~i~s 110 (594)
T Consensus 111 ~~gGlGl~lI~~lmDeV~~~~ 131 (158)
T PRK04069 111 REGGLGLFLIETLMDDVTVYK 131 (158)
T ss_pred CCCCCHHHHHHHHCCEEEEEE
T ss_conf 678740999997525589990