HHsearch alignment for GI: 254780399 and conserved domain: PRK09835
>PRK09835 sensor kinase CusS; Provisional.
Probab=97.64 E-value=0.00032 Score=49.96 Aligned_cols=60 Identities=8% Similarity=0.185 Sum_probs=33.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 222346783477779998999986695999607987999952611155678999999999998578
Q gi|254780399|r 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 (594)
Q Consensus 459 ~P~~i~Ls~~e~~~l~~~~~~l~~~Gf~~e~~g~~~~~i~~iP~~l~~~~~~~~l~dll~~l~~~~ 524 (594)
T Consensus 332 ~~~~~dl~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~v~~d~~-----~l~~~l~NLl~NAikys 391 (482)
T PRK09835 332 EKKMLNLADEVGKVFDFFEALAEDRGVELRFVG-DPCQVAGDPL-----MLRRALSNLLSNALRYT 391 (482)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC-CCEEEEECHH-----HHHHHHHHHHHHHHHHC
T ss_conf 673456999999999999999986892899827-8708998799-----99999999999999848