HHsearch alignment for GI: 254780399 and conserved domain: PRK11086
>PRK11086 sensory histidine kinase DcuS; Provisional.
Probab=98.49 E-value=2e-06 Score=65.85 Aligned_cols=21 Identities=10% Similarity=0.086 Sum_probs=14.8
Q ss_pred CCCCCCHHHHHHHHHHHHHCC
Q ss_conf 588889899999999998188
Q gi|254780399|r 548 SGRKMQSIEMNRLLREMEKNP 568 (594)
Q Consensus 548 ~gd~L~~~e~~~Li~~L~~c~ 568 (594)
T Consensus 496 ~g~GLGLaIvk~iVe~~gG~I 516 (541)
T PRK11086 496 SNRGVGLYLVKQSVENLGGSI 516 (541)
T ss_pred CCCCCCHHHHHHHHHHCCCEE
T ss_conf 991103999999999859989