HHsearch alignment for GI: 254780399 and conserved domain: PRK13837

>PRK13837 two-component VirA-like sensor kinase; Provisional.
Probab=97.75  E-value=0.00017  Score=51.95  Aligned_cols=106  Identities=17%  Similarity=0.156  Sum_probs=50.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCC--------------EEEEEECCCCCCCCCHHHHHHHHHHHH--HHCCC
Q ss_conf             34678347777999899998669599960798--------------799995261115567899999999999--85788
Q gi|254780399|r  462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPN--------------AIAIREIPAILSKKNIPQLLRDIIDEI--IDSST  525 (594)
Q Consensus       462 ~i~Ls~~e~~~l~~~~~~l~~~Gf~~e~~g~~--------------~~~i~~iP~~l~~~~~~~~l~dll~~l--~~~~~  525 (594)
T Consensus       701 ~ILvVdDe~~vr~~~~~~L~~lGY~v~~a~~~~~Al~~~~~~~~~~DLvltD~~p~~~g~~~~~~l~~~~p~lpVilsg-  779 (831)
T PRK13837        701 TVLLVEPDDALLERYEEKLAALGYEPVGFSTLSAAIAWISKDGKRFDLVLVDQPSLGDSQLAIAALHAAAPTLPIILAG-  779 (831)
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEC-
T ss_conf             7999859889999999999967996888689999999998389985399988999998799999998618997499976-


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf             66468999999997634866645888898999999999981888878
Q gi|254780399|r  526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ  572 (594)
Q Consensus       526 ~~~~~~~~~~~l~s~ACr~AIk~gd~L~~~e~~~Li~~L~~c~~P~~  572 (594)
T Consensus       780 -~~~~~~~~~~~~---~~~~~fL~KPfs~~~LA~avR~aL~~~r~~~  822 (831)
T PRK13837        780 -SSLKMAAREALA---TAIAEILPKPISSRTLAYALRTALATARAAG  822 (831)
T ss_pred             -CCCHHHHHCHHH---CCCCEEEECCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             -881443311022---2667065099999999999999984888876