HHsearch alignment for GI: 254780399 and conserved domain: PTZ00109
>PTZ00109 DNA gyrase subunit b; Provisional.
Probab=98.24 E-value=3.2e-06 Score=64.38 Aligned_cols=159 Identities=23% Similarity=0.333 Sum_probs=106.6
Q ss_pred CCCHHHHHHHHHHHHHH---C-CCCEEEEEEECCCEEEEEEEECCCCCCHH--------HHHHHH-CCCCCCCCHHHH--
Q ss_conf 26978999999987772---6-99679999980984399999888998898--------999875-024665631244--
Q gi|254780399|r 20 IERPSIAIKELIENSLD---A-ESSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMAV-QRHCTSKISDDF-- 84 (594)
Q Consensus 20 i~~~~svVkELveNSlD---A-gAt~I~v~i~~~g~~~i~V~DnG~Gi~~~--------dl~~~~-~rh~TSKi~~dl-- 84 (594)
T Consensus 83 ~~GlHHlv~EIvDNSvDEalaG~c~~I~V~l~~DgS--vtV~DnGRGIPvD~hpk~~~salEvVlT~LHAGGKF~dd~~~ 160 (941)
T PTZ00109 83 VKGLHQILFEIIDNSVDEYNNFECNEIKIVIHKDDS--VTIEDNGRGIPCDVHEKTKKSALETVLTVLHSGAKFFDDEAD 160 (941)
T ss_pred CCCCCCEEEEEHHCHHHHHHCCCCCEEEEEEECCCC--EEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
T ss_conf 986321221001256879861899668999947997--899889976788878888985028888541557565776443
Q ss_pred ---H------------------------------------------------------------------HCCCCCCCHH
Q ss_conf ---1------------------------------------------------------------------1214884048
Q gi|254780399|r 85 ---S------------------------------------------------------------------NIHTFGFRGE 95 (594)
Q Consensus 85 ---~------------------------------------------------------------------~i~t~GFRGE 95 (594)
T Consensus 161 ~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~~~~~~~~~~~~~~a~~k~~~~~Yk~SGGLHGV 240 (941)
T PTZ00109 161 AEIDGGMNNGGLSDGGEEDNRDAIGEHKGEHKGEKKAKANVAERGAEKLDEKKSPQKTPKEAPQKEPAQKYKFSSGLHGV 240 (941)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 21223334444444433222222222332212232221112233443322233333343333345568762246667866
Q ss_pred HHHHHHHHE-EEEEEEECCCCCCCEEEEECCCCCCCC---CCC-CCCCCCEEEEE---HHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 999876202-489998048986301551101000002---110-12567578852---1012112543103453689999
Q gi|254780399|r 96 ALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSV---RPV-AMNPGTIVEVR---DLFFTIPARLNFLKSEQVETNL 167 (594)
Q Consensus 96 AL~sIa~vs-~l~i~s~~~~~~~~~~~~~~~g~~~~~---~~~-~~~~GT~V~V~---~LF~N~PvRrkflks~~~e~~~ 167 (594)
T Consensus 241 GvSVVNALS~~l~v~V~Rdgk--~y~~~f~~G~~~~~L~v~~~~~~k~GT~I~F~PD~~IF~~---------~~~f~~~~ 309 (941)
T PTZ00109 241 GLSVANALSSFMKVKVFRNGK--IHSIELEKGKVTKELSIRDCPINKRGTQIHYKPDPSIFKN---------SIKHNADL 309 (941)
T ss_pred CEEEEECCCCEEEEEEEECCE--EEEEEECCCEECCCCEECCCCCCCCCCEEEEECCHHHHCC---------CCCCCHHH
T ss_conf 668670365758999999999--9999968990888535407888999757999778688588---------76568999
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 999999987318997499998798
Q gi|254780399|r 168 ITDVIRRMAIAYPKVSFTFSTIKS 191 (594)
Q Consensus 168 I~~~v~~~aL~~P~V~f~l~~~~~ 191 (594)
T Consensus 310 l~~RlrelAfLn~gL~I~~~Der~ 333 (941)
T PTZ00109 310 IKNRIHQLAYLNDKLSFYFYDERA 333 (941)
T ss_pred HHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 999999970267887799997067