HHsearch results for GI: 254780399 and protein with PDBid: 1s16_A
>1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2
Probab=98.78 E-value=5.1e-07 Score=68.55 Aligned_cols=177 Identities=20% Similarity=0.298 Sum_probs=113.4
Q ss_pred CHHHHHHHHHHHHHHC----CCCEEEEEEECCCEEEEEEEECCCCCCHH--------HHHHH-HCCCCCCCCHHHHHHCC
Q ss_conf 9789999999877726----99679999980984399999888998898--------99987-50246656312441121
Q gi|254780399|r 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMA-VQRHCTSKISDDFSNIH 88 (594)
Q Consensus 22 ~~~svVkELveNSlDA----gAt~I~v~i~~~g~~~i~V~DnG~Gi~~~--------dl~~~-~~rh~TSKi~~dl~~i~ 88 (594)
.+...+.|+|.||+|- -|++|.|.+...| .|.|.|||.||+-+ -.+++ +.-|+-||..++-+. .
T Consensus 31 gl~~~~~EildNavDe~~~~~~~~I~V~i~~dg--~isV~dnGrGIPv~~h~~~~~~~~elif~~L~tg~nfd~~~~k-~ 107 (390)
T 1s16_A 31 RPNHLGQEVIDNSVDEALAGHAKRVDVILHADQ--SLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQ-F 107 (390)
T ss_dssp STHHHHHHHHHHHHHHHHTTCCSEEEEEECTTS--CEEEEECSSCCCCSBCTTTCSBHHHHHHHCTTEESCSSSSSCS-S
T ss_pred CCCEEEEEEEECCHHHHHCCCCCEEEEEECCCC--EEEEEECCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCC-E
T ss_conf 852078699874650674299967999991898--6999988995000456566877138889876036767887742-3
Q ss_pred CCCCCHHHHHHHHHHE-EEEEEEECCCCCCCEEEEECCCCCCCCC----CCC-CCCCCEEEEEHHHHHHHHHHHCCCCHH
Q ss_conf 4884048999876202-4899980489863015511010000021----101-256757885210121125431034536
Q gi|254780399|r 89 TFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVR----PVA-MNPGTIVEVRDLFFTIPARLNFLKSEQ 162 (594)
Q Consensus 89 t~GFRGEAL~sIa~vs-~l~i~s~~~~~~~~~~~~~~~g~~~~~~----~~~-~~~GT~V~V~~LF~N~PvRrkflks~~ 162 (594)
|-|--|--++..-+.| .+++.++..+ .-|...+..|...... .+. ...||+|+-. -=|.|- ....
T Consensus 108 sgG~nGvGakl~NalS~~f~v~v~~~~--~~~~q~f~~g~~~~~~~~i~~~~~~~~gT~ItF~----PD~~~F---~~~~ 178 (390)
T 1s16_A 108 SGGLHGVGISVVNALSKRVEVNVRRDG--QVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFW----PDETFF---DSPR 178 (390)
T ss_dssp CSCCSSCHHHHHHHTEEEEEEEEEETT--EEEEEEEETTEEEEEEEEEEECCTTCCEEEEEEE----ECGGGS---SCCS
T ss_pred ECCCCCCCEEEEEECCCEEEEEEEECC--EEEEEEECCCCCCCCCEEEECCCCCCCCEEEEEE----ECHHHH---CCCC
T ss_conf 067576245898962410799998646--7689996399745672176145778996899999----486870---4423
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 89999999999987318997499998798307997178810489999973
Q gi|254780399|r 163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQV 212 (594)
Q Consensus 163 ~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~~~~l~~~~~~~~l~~ri~~i 212 (594)
.....+...+++.|..+|.+.+.+.............. +.+.+-+..+
T Consensus 179 ~~~~~i~~~~k~~a~l~~gl~i~~~~~~~~~~~~~~~~--~Gi~~y~~~~ 226 (390)
T 1s16_A 179 FSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQ--DGLNDYLAEA 226 (390)
T ss_dssp CCHHHHHHHHHHHHHHSTTCEEEEEETTTTEEEEECCS--SCHHHHHHHH
T ss_pred CCHHHHHHHHHHHEEECCCCEEEEEECCCCEEEEEEEC--CCHHHHHHHH
T ss_conf 26999999998752886895578875168706777604--8676778887