HHsearch results for GI: 254780399 and protein with PDBid: 1th8_A
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A*
Probab=97.66 E-value=0.00036 Score=48.07 Aligned_cols=91 Identities=18% Similarity=0.258 Sum_probs=56.3
Q ss_pred CCCHHHHHHHHHHHHHHCC-----CCEEEEEEE-CCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 2697899999998777269-----967999998-0984399999888998898999875024665631244112148840
Q gi|254780399|r 20 IERPSIAIKELIENSLDAE-----SSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFR 93 (594)
Q Consensus 20 i~~~~svVkELveNSlDAg-----At~I~v~i~-~~g~~~i~V~DnG~Gi~~~dl~~~~~rh~TSKi~~dl~~i~t~GFR 93 (594)
+...-.+|.|++.|+|..| ...|.|.+. +.+.-.|.|.|||.||++ +..+.++..|.+- ..+-.
T Consensus 37 i~di~lav~E~~~NaI~Ha~~~~~~~~I~i~~~~~~~~l~i~V~D~G~Gi~~--~~~~~~~~~~~~~--------~~~~~ 106 (145)
T 1th8_A 37 LTEIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTVRDEGVGIPD--IEEARQPLFTTKP--------ELERS 106 (145)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTCTTSEEEEEEEEETTEEEEEEEECSSCCSC--HHHHTCCC---------------CCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCC--HHHCCCCCCCCCC--------CCCCC
T ss_conf 9999999999999998843489999089999999378999999964789585--7753787754467--------99957
Q ss_pred HHHHHHHHHHE-EEEEEEECCCCCCCEEEEE
Q ss_conf 48999876202-4899980489863015511
Q gi|254780399|r 94 GEALPSIGAVS-HLTLMSRPPQNNTGAQIAI 123 (594)
Q Consensus 94 GEAL~sIa~vs-~l~i~s~~~~~~~~~~~~~ 123 (594)
|=.|+-|..+. +++|.|+. ..|+++++
T Consensus 107 GlGL~ii~~l~d~i~i~s~~---~~Gt~v~l 134 (145)
T 1th8_A 107 GMGFTIMENFMDEVIVESEV---NKGTTVYL 134 (145)
T ss_dssp SCHHHHHHHHSSEEEEEEET---TTEEEEEE
T ss_pred CHHHHHHHHHCCEEEEEECC---CCCEEEEE
T ss_conf 36899999969999999839---99699999