HHsearch results for GI: 254780399 and protein with PDBid: 2qq9_A
>2qq9_A Diphtheria toxin repressor; regulator, DTXR, helix-turn-helix, metal ION, activation, DNA-binding, ferrous iron, cytoplasm; 1.71A {Corynebacterium diphtheriae} PDB: 2tdx_A 1ddn_A 1g3t_A 1g3s_A 1g3w_A 2qqa_A 2qqb_A 2dtr_A 1bi0_A 1bi2_A 1bi3_A 1dpr_A 1bi1_A 1fwz_A 1g3y_A 1c0w_A* 3glx_A 1p92_A 1xcv_A 1f5t_A ...
Probab=93.61 E-value=0.039 Score=33.44 Aligned_cols=97 Identities=12% Similarity=0.171 Sum_probs=48.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCHHHHHH--HHHHHHH-HCCCCCCHHHHHHHHHH
Q ss_conf 34678347777999899998669599960798799995261115567899999--9999998-57886646899999999
Q gi|254780399|r 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR--DIIDEII-DSSTTYTLQDRIENILA 538 (594)
Q Consensus 462 ~i~Ls~~e~~~l~~~~~~l~~~Gf~~e~~g~~~~~i~~iP~~l~~~~~~~~l~--dll~~l~-~~~~~~~~~~~~~~~l~ 538 (594)
.+.+++.- ..+....|.+-|+.-. ...+.+.++.- +...+..+++ .+++.+. +.-. .. ++-
T Consensus 33 ~L~vs~~s---vt~~l~~L~~~Gli~~-~~~~~v~LT~~----G~~~A~~i~rrHrl~E~fL~~~lg-~~-----~~~-- 96 (226)
T 2qq9_A 33 RLEQSGPT---VSQTVARMERDGLVVV-ASDRSLQMTPT----GRTLATAVMRKHRLAERLLTDIIG-LD-----INK-- 96 (226)
T ss_dssp HHTCCHHH---HHHHHHHHHHTTSEEE-CTTSBEEECHH----HHHHHHHHHHHHHHHHHHHHHTTC-CC-----HHH--
T ss_pred HHCCCHHH---HHHHHHHHHHCCCEEE-CCCCCEEECHH----HHHHHHHHHHHHHHHHHHHHHHHC-CC-----HHH--
T ss_conf 96899179---9999999998899897-28978798988----999999999999999999999709-99-----999--
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEE
Q ss_conf 76348666458888989999999999818888788788727
Q gi|254780399|r 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 (594)
Q Consensus 539 s~ACr~AIk~gd~L~~~e~~~Li~~L~~c~~P~~CpHGRPt 579 (594)
|+.-|-+.-+.++.+...+|..-| .+|-+||||.|+
T Consensus 97 --~~~~A~~lEH~~s~~~~~~l~~~L---g~p~~~PhG~pI 132 (226)
T 2qq9_A 97 --VHDEADRWEHVMSDEVERRLVKVL---KDVSRSPFGNPI 132 (226)
T ss_dssp --HHHHHHHHTTTCCHHHHHHHHHHS---SCCSBCTTSCBC
T ss_pred --HHHHHHHHHHCCCHHHHHHHHHHH---CCCCCCCCCCCC
T ss_conf --999998887049999999999994---899979796967