HHsearch results for GI: 254780399 and protein with PDBid: 2zbk_B
>2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae}
Probab=99.94 E-value=3.2e-26 Score=206.61 Aligned_cols=176 Identities=19% Similarity=0.183 Sum_probs=146.6
Q ss_pred CCCCHHHHHHHHHHHHHHCCCC-------EEEEEEE--CCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCH--HHHHHC
Q ss_conf 2269789999999877726996-------7999998--0984399999888998898999875024665631--244112
Q gi|254780399|r 19 IIERPSIAIKELIENSLDAESS-------RVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNI 87 (594)
Q Consensus 19 vi~~~~svVkELveNSlDAgAt-------~I~v~i~--~~g~~~i~V~DnG~Gi~~~dl~~~~~rh~TSKi~--~dl~~i 87 (594)
++-++++||||||+||+||+|+ .|.|.+. +.+...|.|.|||+||+++|+..++.+|+||+.+ .|+...
T Consensus 28 ~~~~l~~~vkELi~Na~DA~a~~~~~~~i~v~I~~~~~~~~~~~i~V~DnGiGms~e~l~~~f~~f~~s~~~~~~~~~G~ 107 (530)
T 2zbk_B 28 PARALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKYVNRQTRGM 107 (530)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTTTCCCCCEEEEEEEETTTTEEEEEEECCSCCCCGGGSHHHHTSCCCSCCCCCSCCSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 46569999999999999888725898835999998348995789999962898999999998642034776453244786
Q ss_pred CCCCCCHHHHHHHHHHEE-EEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 148840489998762024-8999804898630155110100000211012567578852101211254310345368999
Q gi|254780399|r 88 HTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN 166 (594)
Q Consensus 88 ~t~GFRGEAL~sIa~vs~-l~i~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~GT~V~V~~LF~N~PvRrkflks~~~e~~ 166 (594)
.++||||+++.|+..++. +++.|+..++..+|..... ......+.....||++.+.++|+++|+|.++++....+..
T Consensus 108 ~GlGl~~~~~~s~~~~g~~v~v~S~~~~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (530)
T 2zbk_B 108 YGLGVKAAVLYSQMHQDKPIEIETSPVNSKRIYTFKLK--IDINKNEPIIVERGSVENTRGFHGTSVAISIPGDWPKAKS 185 (530)
T ss_dssp SSSHHHHHHHHHHHHCCCCEEEEEECTTCSEEEEEEEE--EETTTTEEEEEEEEEEECCSSCCEEEEEEEEECCHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECC--CCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCHHHHHHH
T ss_conf 54458999999998059759999945899648998334--4356676534578665035677731466500005555555
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCEEEE
Q ss_conf 999999998731899749999879830799
Q gi|254780399|r 167 LITDVIRRMAIAYPKVSFTFSTIKSNRYKM 196 (594)
Q Consensus 167 ~I~~~v~~~aL~~P~V~f~l~~~~~~~~~l 196 (594)
.+.+.+..+++.+|++.|.+..........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (530)
T 2zbk_B 186 RIYEYIKRTYIITPYAEFIFKDPEGNVTYY 215 (530)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECTTSCEEEE
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCEEEE
T ss_conf 589999987632888638997389734652