HHsearch results for GI: 254780399 and protein with PDBid: 3g7e_A
>3g7e_A DNA gyrase subunit B; isomerase; HET: DNA B46; 2.20A {Escherichia coli} PDB: 1kzn_A* 1aj6_A*
Probab=98.65 E-value=6.5e-07 Score=67.77 Aligned_cols=163 Identities=16% Similarity=0.255 Sum_probs=109.7
Q ss_pred CCCHHHHHHHHHHHHHHC----CCCEEEEEEECCCEEEEEEEECCCCCCHH--------HHHHHH-CCCCCCCCHHHHHH
Q ss_conf 269789999999877726----99679999980984399999888998898--------999875-02466563124411
Q gi|254780399|r 20 IERPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMAV-QRHCTSKISDDFSN 86 (594)
Q Consensus 20 i~~~~svVkELveNSlDA----gAt~I~v~i~~~g~~~i~V~DnG~Gi~~~--------dl~~~~-~rh~TSKi~~dl~~ 86 (594)
.+.+...+.|+|.||+|. .++.|.|.+...| .|.|.|||.||+-+ -.++++ .-|+-||..+|-++
T Consensus 19 ~~gl~~i~~Eil~NavDe~~~~~~~~i~v~i~~dg--~isV~ddG~GIPv~~h~~~~~~~~elif~~l~tg~nyd~~~~~ 96 (203)
T 3g7e_A 19 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADN--SVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYK 96 (203)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTS--CEEEEECSSCCCCSCCTTTCCCHHHHHHHSTTCCSEECTTCCE
T ss_pred CCCCEEEEEEEEEEHHHHHCCCCCCEEEEEECCCC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCE
T ss_conf 87274899988883445631599976899996799--7999989977456445766982206899898404778888613
Q ss_pred CCCCCCCHHHHHHHHHHEE-EEEEEECCCCCCCEEEEECCCCCCCCC---CCCCCCCCEEEEEHHHHHHHHHHHCCCCHH
Q ss_conf 2148840489998762024-899980489863015511010000021---101256757885210121125431034536
Q gi|254780399|r 87 IHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVR---PVAMNPGTIVEVRDLFFTIPARLNFLKSEQ 162 (594)
Q Consensus 87 i~t~GFRGEAL~sIa~vs~-l~i~s~~~~~~~~~~~~~~~g~~~~~~---~~~~~~GT~V~V~~LF~N~PvRrkflks~~ 162 (594)
.|-|-.|--+...-+.|. +++.++..+ .-|...++.|...... ......||+|+ |. |=...|.....
T Consensus 97 -~~gG~nG~G~kl~N~~S~~f~v~~~~~g--k~~~q~f~~g~~~~~~~~~~~~~~~gT~V~----F~--PD~~~F~~~~~ 167 (203)
T 3g7e_A 97 -VSGGLHGVGVSVVNALSQKLELVIQREG--KIHRQIYEHGVPQAPLAVTGETEKTGTMVR----FW--PSLETFTNVTE 167 (203)
T ss_dssp -ESCCCCSSCHHHHHHTEEEEEEEEEETT--EEEEEEEETTEESSCCEEEEECSCCEEEEE----EE--ECTTTCCSCCS
T ss_pred -ECCCCCCCCCEEEEEEEEEEEEEEEECC--EEEEEEECCCEECCCCEECCCCCCCCEEEE----EE--ECCCCCCCCCC
T ss_conf -1167578672898986218999999899--999999849929888235257689988999----99--79310267541
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCE
Q ss_conf 8999999999998731899749999879830
Q gi|254780399|r 163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNR 193 (594)
Q Consensus 163 ~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~~ 193 (594)
-....+.+.++.+|..+|+|.+.|+......
T Consensus 168 ~~~~~l~~r~~~~A~l~~gl~v~~nder~~~ 198 (203)
T 3g7e_A 168 FEYEILAKRLRELSFLNSGVSIRLRDKRDGK 198 (203)
T ss_dssp CCHHHHHHHHHHHHHHSTTCEEEEEETTTCC
T ss_pred CCHHHHHHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf 4799999999998135898589999647897