RPSBLAST alignment of GI: 254780399 and protein with PDBid: 1mu5

>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* Length = 471

 Score = 90.4 bits (224), Expect = 1e-18
 Identities = 38/199 (19%), Positives = 68/199 (34%), Gaps = 22/199 (11%)

Query: 25  IAIKELIENSLDAESS---------RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75
             ++ELIENSLDA             ++ +          + DNG G+  +E+P A  R 
Sbjct: 35  QTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQEVPNAFGRV 94

Query: 76  CTSKISDDFSNIHTFGFRGEALPSIGAVS------HLTLMSRPPQNNTGAQIAISGEKIS 129
                S  + N  T G  G  + +    S       + + + P  +       +    I+
Sbjct: 95  LY---SSKYVNRQTRGMYGLGVKAAVLYSQMHQDKPIEIETSPVNSKRIYTFKLKI-DIN 150

Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189
              P+ +  G++ E    F      ++         + I + I+R  I  P   F F   
Sbjct: 151 KNEPIIVERGSV-ENTRGFHGTSVAISIPGDWPKAKSRIYEYIKRTYIITPYAEFIFKDP 209

Query: 190 KSNRYKMNFQSTNGNFPER 208
           + N     +       P+ 
Sbjct: 210 EGNV--TYYPRLTNKIPKP 226