RPSBLAST alignment of GI: 254780399 and protein with PDBid: 2zbk

>2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} Length = 530

 Score = 89.5 bits (220), Expect = 2e-18
 Identities = 61/514 (11%), Positives = 129/514 (25%), Gaps = 45/514 (8%)

Query: 26  AIKELIENSLDAESS---------RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76
            ++ELIENSLDA             ++ +          + DNG G+  +E+P A  R  
Sbjct: 35  TVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQEVPNAFGRVL 94

Query: 77  TSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134
            S          ++  G +   L S         +   P N+           I+   P+
Sbjct: 95  YSSKYVNRQTRGMYGLGVKAAVLYSQMHQDKPIEIETSPVNSKRIYTFKLKIDINKNEPI 154

Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194
            +     VE    F      ++         + I + I+R  I  P   F F   + N  
Sbjct: 155 IVE-RGSVENTRGFHGTSVAISIPGDWPKAKSRIYEYIKRTYIITPYAEFIFKDPEGNVT 213

Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254
                +                      E+      +  +    +    + +       +
Sbjct: 214 YYPRLT--------------NKIPKPPQEVKPHPYGVDREEIKILINNLKRDYTIKEFLV 259

Query: 255 NGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314
           N                  + + L        +  +   ++   V   K    FR+P   
Sbjct: 260 NEFQSIGDTTAD-------KILELAGLKPNKKVKNLTEEEITRLVETFKKDEDFRSP--- 309

Query: 315 RNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN 374
               +  I + + + G+                   PK +                +   
Sbjct: 310 SADSLSVIGEDLIELGLKKIFNPDFA----ASITRKPKAYQGHPFIVEAGVAFGGSIPVG 365

Query: 375 RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI-ACAQIHQNYIISQTTDGLVIVDQHA 433
                    +  P   ++   V                      ++        I  + A
Sbjct: 366 EEPIVLRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQMVVMVHLCSTKIPYKSA 425

Query: 434 AHERL--IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491
             E +  +    ++  N+    ++ L         E E    +        +   +    
Sbjct: 426 GKESIAEVENIEKEIKNALMEVARKLKQYLSEKRKEQEAKKKLLAYLKY--IPEVSRSLA 483

Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525
               +  +      +  I + L  +I + +D   
Sbjct: 484 TFLASGNKELVSKYQNEISEGLFKLISKKLDLIN 517