HHsearch alignment for GI: 254780400 and conserved domain: TIGR02890
>TIGR02890 spore_yteA sporulation protein, yteA family; InterPro: IPR014240 This entry contains predicted regulatory proteins that are found in nearly every species of the endospore-forming bacteria within the Firmicutes (low-GC Gram-positive bacteria), with the exception of Clostridium perfringens. Some (but not all) of these proteins contain an unusual DksA/TraR C4-type zinc finger, where only one of the four key Cys residues is conserved. All members of this entry share an additional C-terminal domain. The function of proteins in this family is unknown. YteA is found in mature spores of Bacillus subtilis and its expression appeasr to be regulated by sigma-K ..
Probab=94.21 E-value=0.015 Score=37.96 Aligned_cols=23 Identities=39% Similarity=0.810 Sum_probs=20.1
Q ss_pred EEECCCEEEEEECCCEECHHHCC
Q ss_conf 92079889984149670677654
Q gi|254780400|r 21 IIRPGTYVVCAITGQRIPLKKLC 43 (71)
Q Consensus 21 ii~~G~yV~CAVsgk~IpL~~L~ 43 (71)
T Consensus 82 ~ie~GtYGICe~cG~~Ip~ERLE 104 (167)
T TIGR02890 82 KIENGTYGICEVCGKPIPYERLE 104 (167)
T ss_pred HHHCCCCEEECCCCCCCCHHHHH
T ss_conf 98578970004487879844420