HHsearch alignment for GI: 254780401 and conserved domain: KOG0780

>KOG0780 consensus.
Probab=96.55  E-value=0.011  Score=39.71  Aligned_cols=194  Identities=19%  Similarity=0.227  Sum_probs=109.6

Q ss_pred             EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHH--CCCCCCCCCH
Q ss_conf             89982300078887489999999985247315987604578777755871456788770421233220--5763465201
Q gi|254780401|r   46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLAR--RAVTIVTSDR  123 (338)
Q Consensus        46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~--~~pv~V~~~R  123 (338)
T Consensus       104 imfVG---LqG~GKTTtc~KlA~y~kkkG~K~~LvcaD------------TFRagAf---DQLkqnA~k~~iP~ygsyte  165 (483)
T KOG0780         104 IMFVG---LQGSGKTTTCTKLAYYYKKKGYKVALVCAD------------TFRAGAF---DQLKQNATKARVPFYGSYTE  165 (483)
T ss_pred             EEEEE---CCCCCCCEEHHHHHHHHHHCCCCEEEEEEC------------CCCCCHH---HHHHHHHHHHCCEEEECCCC
T ss_conf             99983---057886300899999998468724577602------------2453068---99998767407706840366


Q ss_pred             HH-------HHHHHCCCCCCEEEECCCCCCC--------------CCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHHH
Q ss_conf             22-------5664102457479971832234--------------41230699996184335665537613652100255
Q gi|254780401|r  124 KI-------GVQMLLQEGVDIIIMDDGFHSA--------------DLQADFSLIVVNSHRGLGNGLVFPAGPLRVPLSRQ  182 (338)
Q Consensus       124 ~~-------~~~~~~~~~~diiIlDDGfQh~--------------~l~rdl~Ivl~d~~~~~gn~~llPaGpLREp~~~~  182 (338)
T Consensus       166 ~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQa----------ae~Qa~a  235 (483)
T KOG0780         166 ADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQA----------AEAQARA  235 (483)
T ss_pred             CCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHH----------HHHHHHH
T ss_conf             555899999999888639728998278730124899999999985159873899985620076----------7999998


Q ss_pred             HHH---HHHHHHCCCCHHH-----HH--HHCCCCHHH-HHHHH-CCCCCCCCCE-EEEEECCCCHHHHHHHHHHHCCC-C
Q ss_conf             665---1454420441245-----77--631350111-22220-1321116863-89874155357899988740100-0
Q gi|254780401|r  183 LSY---VDAILYVGNKKNV-----IS--SIKNKSVYF-AKLKP-RLTFDLSGKK-VLAFSGIADTEKFFTTVRQLGAL-I  248 (338)
Q Consensus       183 l~r---ad~vi~~~~~~~~-----~~--~~~~~~i~~-~~~~~-~~~~~l~~k~-v~afsGIa~P~~F~~~L~~~g~~-i  248 (338)
T Consensus       236 Fk~~vdvg~vIlTKlDGhakGGgAlSaVaaTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glvek~~ev~~~d~  315 (483)
T KOG0780         236 FKETVDVGAVILTKLDGHAKGGGALSAVAATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLVEKVQEVGKDDA  315 (483)
T ss_pred             HHHHHCCCEEEEEECCCCCCCCCEEEEHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             87761540379972256777773453035407987998167551115777807799987156528999999999855208


Q ss_pred             CCCCCCCCCCCCCHHHHHH
Q ss_conf             0122143323489899999
Q gi|254780401|r  249 EQCYSFGDHAHLSDKKIAY  267 (338)
Q Consensus       249 ~~~~~fpDHh~ys~~dl~~  267 (338)
T Consensus       316 ~el~~kl~~gkFtlrd~y~  334 (483)
T KOG0780         316 KELVEKLKQGKFTLRDFYD  334 (483)
T ss_pred             HHHHHHHHHCCCCHHHHHH
T ss_conf             9999998828701999999