HHsearch alignment for GI: 254780401 and conserved domain: KOG0780
>KOG0780 consensus.
Probab=96.55 E-value=0.011 Score=39.71 Aligned_cols=194 Identities=19% Similarity=0.227 Sum_probs=109.6
Q ss_pred EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHHHH--CCCCCCCCCH
Q ss_conf 89982300078887489999999985247315987604578777755871456788770421233220--5763465201
Q gi|254780401|r 46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLLAR--RAVTIVTSDR 123 (338)
Q Consensus 46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~lla~--~~pv~V~~~R 123 (338)
T Consensus 104 imfVG---LqG~GKTTtc~KlA~y~kkkG~K~~LvcaD------------TFRagAf---DQLkqnA~k~~iP~ygsyte 165 (483)
T KOG0780 104 IMFVG---LQGSGKTTTCTKLAYYYKKKGYKVALVCAD------------TFRAGAF---DQLKQNATKARVPFYGSYTE 165 (483)
T ss_pred EEEEE---CCCCCCCEEHHHHHHHHHHCCCCEEEEEEC------------CCCCCHH---HHHHHHHHHHCCEEEECCCC
T ss_conf 99983---057886300899999998468724577602------------2453068---99998767407706840366
Q ss_pred HH-------HHHHHCCCCCCEEEECCCCCCC--------------CCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHHH
Q ss_conf 22-------5664102457479971832234--------------41230699996184335665537613652100255
Q gi|254780401|r 124 KI-------GVQMLLQEGVDIIIMDDGFHSA--------------DLQADFSLIVVNSHRGLGNGLVFPAGPLRVPLSRQ 182 (338)
Q Consensus 124 ~~-------~~~~~~~~~~diiIlDDGfQh~--------------~l~rdl~Ivl~d~~~~~gn~~llPaGpLREp~~~~ 182 (338)
T Consensus 166 ~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQa----------ae~Qa~a 235 (483)
T KOG0780 166 ADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQA----------AEAQARA 235 (483)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHH----------HHHHHHH
T ss_conf 555899999999888639728998278730124899999999985159873899985620076----------7999998
Q ss_pred HHH---HHHHHHCCCCHHH-----HH--HHCCCCHHH-HHHHH-CCCCCCCCCE-EEEEECCCCHHHHHHHHHHHCCC-C
Q ss_conf 665---1454420441245-----77--631350111-22220-1321116863-89874155357899988740100-0
Q gi|254780401|r 183 LSY---VDAILYVGNKKNV-----IS--SIKNKSVYF-AKLKP-RLTFDLSGKK-VLAFSGIADTEKFFTTVRQLGAL-I 248 (338)
Q Consensus 183 l~r---ad~vi~~~~~~~~-----~~--~~~~~~i~~-~~~~~-~~~~~l~~k~-v~afsGIa~P~~F~~~L~~~g~~-i 248 (338)
T Consensus 236 Fk~~vdvg~vIlTKlDGhakGGgAlSaVaaTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glvek~~ev~~~d~ 315 (483)
T KOG0780 236 FKETVDVGAVILTKLDGHAKGGGALSAVAATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLVEKVQEVGKDDA 315 (483)
T ss_pred HHHHHCCCEEEEEECCCCCCCCCEEEEHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 87761540379972256777773453035407987998167551115777807799987156528999999999855208
Q ss_pred CCCCCCCCCCCCCHHHHHH
Q ss_conf 0122143323489899999
Q gi|254780401|r 249 EQCYSFGDHAHLSDKKIAY 267 (338)
Q Consensus 249 ~~~~~fpDHh~ys~~dl~~ 267 (338)
T Consensus 316 ~el~~kl~~gkFtlrd~y~ 334 (483)
T KOG0780 316 KELVEKLKQGKFTLRDFYD 334 (483)
T ss_pred HHHHHHHHHCCCCHHHHHH
T ss_conf 9999998828701999999